| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1051 |
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| Symbol | dacD |
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| ID | 6147385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1070106 |
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| End bp | 1071278 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641615938 |
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| Product | D-alanyl-D-alanine carboxypeptidase |
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| Protein accession | YP_001743130 |
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| Protein GI | 170683658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.168288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGTTGA AACGCCGTCT TATTATTGCT GCTTCTTTGT TCGTTTTTAA TTTATCGTCT
GGTTTTGCGG CGGAAAACAT TCCTTTTTCA CCTCAGCCTC CAGAGATTCA TGCCGGGTCC
TGGGTATTGA TGGATTACAC CACCGGTCAG ATTCTCACCG CGGGTAATGA GCATCAACAG
CGCAATCCCG CCAGCCTGAC AAAGCTGATG ACGGGCTATG TCGTGGATCG TGCTATCGAT
AGTCATCGCA TTACGCCAGA CGATATTGTC ACCGTGGGGC GTGATGCGTG GGCGAAAGAT
AATCCGGTGT TTGTCGGTTC TTCACTGATG TTTTTGAAAG AGGGCGATCG CGTATCGGTA
CGTGATTTAA GCCGTGGTTT AATTGTGGAT TCCGGAAATG ACGCTTGTGT TGCACTGGCT
GACTATATTG CCGGTGGGCA ACGGCAGTTT GTTGAAATGA TGAACAACTA TGCCGAGAAG
CTGCATCTCA AGGATACGCA TTTTGAAACA GTGCATGGTC TGGATGCACC TGGCCAGCAT
AGCTCGGCTT ATGATTTAGC TGTGCTTTCT CGCGCTATCA TCCACGGCGA GCCCGAGTTT
TATCATATGT ACAGTGAGAA AAGCCTCACC TGGAACGGTA TCACCCAGCA AAACCGTAAC
GGGTTATTGT GGGATAAAAC CATGAATGTT GACGGCCTGA AAACGGGTCA TACTTCTGGT
GCCGGGTTTA ATCTCATTGC TTCGGCTGTA GATGGGCAGC GTCGTCTCAT TGCAGTGGTA
ATGGGGGCTG ACAGCGCAAA AGGTCGTGAG GAAGAGGCAA GAAAATTACT GCGTTGGGGT
CAACAAAACT TTACTACGGT GCAAATTTTG CACCGTGGGA AAAAGGTTGG TACGGAACGC
ATCTGGTATG GCGATAAAGA AAATATCGCC CTGGGAACGG AACAAGAGTT CTGGATGGTG
CTACCGAAAG CCGAAATTCC ACATATCAAA GCCAAATATA CCCTTGATGG TAAAGAACTC
ACCGCGCCAA TTAGCGCCCA TCAGCGGGTA GGGGAAATTG AACTTTACGA CCGTGATAAA
CAGGTGGCGC ACTGGCCGCT GGTTACCCTG GAATCTGTCG GGGAAGGCAG CATGTTTTCC
CGGCTGAGTG ATTATTTCCA CCATAAGGCC TGA
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| Protein sequence | MLLKRRLIIA ASLFVFNLSS GFAAENIPFS PQPPEIHAGS WVLMDYTTGQ ILTAGNEHQQ
RNPASLTKLM TGYVVDRAID SHRITPDDIV TVGRDAWAKD NPVFVGSSLM FLKEGDRVSV
RDLSRGLIVD SGNDACVALA DYIAGGQRQF VEMMNNYAEK LHLKDTHFET VHGLDAPGQH
SSAYDLAVLS RAIIHGEPEF YHMYSEKSLT WNGITQQNRN GLLWDKTMNV DGLKTGHTSG
AGFNLIASAV DGQRRLIAVV MGADSAKGRE EEARKLLRWG QQNFTTVQIL HRGKKVGTER
IWYGDKENIA LGTEQEFWMV LPKAEIPHIK AKYTLDGKEL TAPISAHQRV GEIELYDRDK
QVAHWPLVTL ESVGEGSMFS RLSDYFHHKA
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