| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1002 |
|---|
| Symbol | wzc |
|---|
| ID | 6147421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1019915 |
|---|
| End bp | 1022077 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641615889 |
|---|
| Product | tyrosine kinase |
|---|
| Protein accession | YP_001743081 |
|---|
| Protein GI | 170681107 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA AAGTAAAACA ACATGCCGCT CCGGTAACGG GCAGTGATGA AATCGATATT
GGTCGCCTGG TCGGCACCGT CATTGAAGCG CGCTGGTGGG TAATTGGCAT CACCGCCGTA
TTTGCCCTCT GTGCCGTGGT TTACACCTTC TTCGCCACGC CGATTTATAG TGCCGACGCA
CTGGTACAAA TCGAGCAAAA CAGCGGCAAT TCGTTAGTGC AGGACATTGG TTCGGCATTA
GCCAACAAAC CGCCAGCATC GGACGCCGAG ATCCAGTTGA TTCGTTCGCG TCTGGTGCTT
GGTAAAACGG TGGACGATCT CGACCTCGAT ATTGCAGTGA GCAAAAACAC GTTCCCTATT
TTCGGTGCGG GCTGGGATCG CCTGATGGGA CGCCAGAACG AGACGGTAAA AGTGACCACC
TTTAACCGCC CGAAAGAGAT GGCGGATCAG GTGTTTACGC TTAATGTGCT GGACGATAAA
AACTACACTC TGAGCAGCGA TGGCGGCTTT AGCGCCCGTG GGCAAGCGGG CCAGATGCTG
AAAAAAGAAG GCGTCACGCT GATGGTTGAA GCCATTCACT CCAGCCCGGG CAGTGAGTTT
ACCGTCACCA AATACTCCAC GCTGGGGATG ATCAACCAAC TGCAAAACAG CCTGACGGTA
ACGGAGAACG GCAAAGACGC AGGCGTACTG AGCCTGACTT ATACCGGTGA AGATCGCGAA
CAGATCCGCG ACATTCTTAA CAGCATCGCC CGTAACTATC AGGAACAAAA TATTGAGCGC
AAATCCGCGG AAGCGTCGAA AAGCCTCGCC TTCCTCGCGC AACAGTTACC GGAAGTACGT
AGCCGCCTTG ATGTTGCCGA AAATAAATTG AATGCCTTCC GTCAGGATAA AGATTCTGTT
GATCTGCCGC TGGAAGCAAA AGCGGTGCTC GATTCGATGG TGAACATCGA CGCACAATTG
AACGAACTGA CCTTTAAAGA AGCGGAAATC TCCAAGCTGT ACACCAAAGT TCACCCGGCG
TATCGCACGC TGCTGGAGAA ACGGCAGGCG CTGGAAGACG AAAAAGCCAA ACTGAACGGT
CGCGTAACGG CGATGCCGAA AACCCAGCAG GAGATTGTCC GTCTGACCCG CGATGTCGAG
TCTGGGCAGC AGGTCTATAT GCAGCTGCTG AATAAAGAGC AGGAGCTGAA AATCACCGAA
GCCAGCACCG TCGGCGATGT GCGCATTGTT GACCCGGCAA TCACCCAGCC AGGTGTGCTA
AAACCGAAGA AAGGGCTGAT TATCCTTGGG GCGATTATCC TTGGCCTGAT GCTCTCTATC
GTGGCTGTGC TGCTGCGCTC GTTGTTTAAT CGCGGCATTG AAAGCCCGCA AGTGCTGGAA
GAACATGGCA TTAGCGTCTA TGCCAGCATC CCGCTGTCGG AGTGGCAGAA AGCGCGCGAT
AGCGTCAAAA CCATCAAAGG GATTAAACGC TATAAACAGA GCCAGCTACT GGCGGTGGGG
AATCCAACCG ATCTGGCGAT TGAAGCCATC CGTAGTCTGC GTACCAGTCT GCACTTCGCG
ATGATGCAGG CGCAGAACAA TGTGTTGATG ATGACCGGGG TTAGCCCGTC AATCGGTAAA
ACCTTTGTCT GCGCCAACCT GGCGGCGGTG ATTAGCCAGA CCAATAAACG GGTGTTGTTG
ATCGACTGCG ATATGCGCAA AGGCTACACC CACGAGCTGT TGGGCACTAA TAACGTTAAT
GGCCTGTCGG AAATTCTGAT TGGACAGGGC GATATTACTA CTGCTGCTAA ACCGACCTCT
ATTGCCAAAT TTGACCTGAT CCCGCGCGGT CAGGTGCCGC CAAATCCTTC TGAACTGTTA
ATGAGCGAAC GCTTTGCCGA ACTGGTGAAG TGGGCGAGTA AAAACTACGA CCTGGTGTTG
ATTGATACGC CGCCGATTCT GGCAGTGACC GATGCGGCAA TTGTTGGTCG TCATGTCGGA
ACCACGTTAA TGGTGGCGCG TTATGCGGTC AACACATTGA AAGAAGTGGA AACCAGTCTG
AGCCGCTTTG AGCAAAATGG TATTCCGGTG AAAGGGGTGA TTCTGAACTC CATCTTCCGC
CGCGCCAGCG CGTATCAGGA TTATGGCTAT TACGAATACG AATATAAGTC GGATGCGAAA
TAA
|
|---|
| Protein sequence | MTEKVKQHAA PVTGSDEIDI GRLVGTVIEA RWWVIGITAV FALCAVVYTF FATPIYSADA
LVQIEQNSGN SLVQDIGSAL ANKPPASDAE IQLIRSRLVL GKTVDDLDLD IAVSKNTFPI
FGAGWDRLMG RQNETVKVTT FNRPKEMADQ VFTLNVLDDK NYTLSSDGGF SARGQAGQML
KKEGVTLMVE AIHSSPGSEF TVTKYSTLGM INQLQNSLTV TENGKDAGVL SLTYTGEDRE
QIRDILNSIA RNYQEQNIER KSAEASKSLA FLAQQLPEVR SRLDVAENKL NAFRQDKDSV
DLPLEAKAVL DSMVNIDAQL NELTFKEAEI SKLYTKVHPA YRTLLEKRQA LEDEKAKLNG
RVTAMPKTQQ EIVRLTRDVE SGQQVYMQLL NKEQELKITE ASTVGDVRIV DPAITQPGVL
KPKKGLIILG AIILGLMLSI VAVLLRSLFN RGIESPQVLE EHGISVYASI PLSEWQKARD
SVKTIKGIKR YKQSQLLAVG NPTDLAIEAI RSLRTSLHFA MMQAQNNVLM MTGVSPSIGK
TFVCANLAAV ISQTNKRVLL IDCDMRKGYT HELLGTNNVN GLSEILIGQG DITTAAKPTS
IAKFDLIPRG QVPPNPSELL MSERFAELVK WASKNYDLVL IDTPPILAVT DAAIVGRHVG
TTLMVARYAV NTLKEVETSL SRFEQNGIPV KGVILNSIFR RASAYQDYGY YEYEYKSDAK
|
|---|
| |