| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0975 |
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| Symbol | |
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| ID | 6146203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 985210 |
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| End bp | 986109 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641615862 |
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| Product | lipid kinase |
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| Protein accession | YP_001743054 |
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| Protein GI | 170683733 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.435416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT TTCCCGCCAG CTTACTGATT CTTAATGGCA AAAGTACTGA CAATCTACCC
CTGCGCGAAG CAATTATGCT GTTGCGTGAG GAAGGAATGA CGATCCATGT GCGGGTCACC
TGGGAGAAAG GCGATGCCGC ACGATATGTA GAGGAGGCCC GGAAGTTGGG CGTCGCAACG
GTGATTGCCG GTGGTGGCGA TGGCACCATT AATGAAGTTT CTACGGCGTT GATTCAGTGT
GAGGGGGATG ACATACCCGC GCTGGGAATT TTGCCATTAG GAACCGCCAA TGATTTTGCC
ACCAGTGTAG GGATTCCTGA GGCACTGGAT AAGGCGCTGA AACTGGCAAT TGCCGGTAAC
GCCATTGCGA TAGATATGGC GCAGGTCAAC AAACAAACCT GTTTTATTAA TATGGCGACA
GGCGGATTTG GGACGCGTAT TACCACAGAA ACGCCGGAAA AATTAAAAGC CGCGCTGGGT
GGCGTCTCTT ACATCATTCA TGGCTTAATG CGCATGGATA CTCTGCAACC GGACCGTTGT
GAAATCCGCG GTGAAAACTT TCACTGGCAA GGTGACGCCC TGGTCATTGG TATTGGTAAC
GGGCGTCAGG CTGGTGGCGG TCAGCAATTG TGCCCGAACG CGTTAATTAA CGATGGCTTG
CTGCAACTGC GCATTTTTAC CGGCGATGAA ATTCTTCCGG CTCTCGTATC AACCTTAAAA
TCTGACGAAG ATAACCCGAA TATTATCGAA GGCGCTTCGT CGTGGTTTGA TATACAAGCC
CCACACGAAA TCACTTTTAA TCTTGATGGC GAACCGTTGA GCGGACAAAA CTTTCATATT
GAAATACTTC CGGCGGCGTT GCGTTGTCGA TTACCACCGG ATTGTCCATT ATTGCGTTAA
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| Protein sequence | MAEFPASLLI LNGKSTDNLP LREAIMLLRE EGMTIHVRVT WEKGDAARYV EEARKLGVAT
VIAGGGDGTI NEVSTALIQC EGDDIPALGI LPLGTANDFA TSVGIPEALD KALKLAIAGN
AIAIDMAQVN KQTCFINMAT GGFGTRITTE TPEKLKAALG GVSYIIHGLM RMDTLQPDRC
EIRGENFHWQ GDALVIGIGN GRQAGGGQQL CPNALINDGL LQLRIFTGDE ILPALVSTLK
SDEDNPNIIE GASSWFDIQA PHEITFNLDG EPLSGQNFHI EILPAALRCR LPPDCPLLR
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