| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0972 |
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| Symbol | gatC |
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| ID | 6144264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 981806 |
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| End bp | 983161 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615859 |
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| Product | PTS system, galactitol-specific IIC component |
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| Protein accession | YP_001743051 |
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| Protein GI | 170683704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
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| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.487394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAG AAGTCATGCG TTATATTCTC GACCTCGGCC CTACGGTGAT GCTGCCGATT
GTCATCATTA TTTTTTCTAA AATATTAGGC ATGAAGGCAG GCGATTGCTT TAAAGCGGGT
CTGCATATCG GGATTGGCTT TGTTGGCATT GGCCTTGTGA TTGGCTTAAT GCTGGATTCC
ATTGGTCCGG CGGCGAAAGC GATGGCGGAA AATTTCGACC TGAATCTGCA TGTGGTCGAT
GTCGGCTGGC CGGGCTCTTC ACCCATGACC TGGGCGTCGC AAATTGCGCT GGTGGCGATT
CCGATTGCGA TTCTGGTTAA CGTGGCGATG TTACTGACCC GTATGACGCG GGTGGTAAAT
GTTGATATCT GGAATATCTG GCATATGACC TTCACCGGCG CGTTGCTGCA TCTGGCAACC
GGTTCATGGA TGATAGGGAT GGCGGGTGTG GTAATTCACG CGGCGTTTGT TTATAAGCTC
GGCGACTGGT TTGCCCGCGA TACCCGAAAT TTCTTTGAGC TGGAAGGCAT TGCCATCCCG
CACGGTACGT CGGCGTATAT GGGGCCAATT GCGGTGCTGG TGGATGCTAT CATCGAGAAA
ATCCCAGGCG TTAACCGAAT TAAATTTAGT GCCGACGATA TTCAGCGCAA ATTTGGTCCG
TTTGGCGAGC CTGTCACCGT GGGTTTTGTG ATGGGGCTGA TTATCGGCAT CCTCGCGGGT
TACGATGTCA AAGGTGTATT GCAGCTGGCG GTAAAAACGG CGGCGGTTAT GCTGCTGATG
CCACGGGTGA TTAAACCCAT CATGGATGGT TTAACGCCCA TCGCTAAGCA GGCCCGTAGT
CGTTTACAGG CGAAGTTCGG CGGTCAGGAG TTCCTGATTG GCCTGGATCC CGCATTACTG
CTGGGGCATA CGGCGGTGGT ATCGGCAAGC CTGATTTTTA TCCCGCTCAC CATTTTAATT
GCTGTTTGTG TGCCGGGTAA TCAGGTGCTG CCGTTTGGCG ACCTTGCCAC CATCGGCTTC
TTTGTGGCGA TGGCGGTCGC GGTGCATCGT GGAAATCTGT TCCGCACCTT AATCTCGGGT
GTCATCATTA TGAGCATCAC CCTGTGGATC GCGACGCAAA CTATTGGTTT GCACACCCAA
CTGGCGGCTA ATGCGGGCGC GTTAAAAGCC GGGGGTATGG TGGCTTCAAT GGATCAGGGC
GGTTCTCCCA TTACCTGGTT ACTGATTCAG GTTTTCTCCC CGCAAAATAT TCCCGGTTTC
ATTATTATCG GCGCAATTTA TCTGACCGGT ATTTTCATGA CCTGGCGTAG AGCGCGTGGT
TTTATTAAAC AAGAGAAAGC CGTTCTCGCA GAATAA
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| Protein sequence | MFSEVMRYIL DLGPTVMLPI VIIIFSKILG MKAGDCFKAG LHIGIGFVGI GLVIGLMLDS
IGPAAKAMAE NFDLNLHVVD VGWPGSSPMT WASQIALVAI PIAILVNVAM LLTRMTRVVN
VDIWNIWHMT FTGALLHLAT GSWMIGMAGV VIHAAFVYKL GDWFARDTRN FFELEGIAIP
HGTSAYMGPI AVLVDAIIEK IPGVNRIKFS ADDIQRKFGP FGEPVTVGFV MGLIIGILAG
YDVKGVLQLA VKTAAVMLLM PRVIKPIMDG LTPIAKQARS RLQAKFGGQE FLIGLDPALL
LGHTAVVSAS LIFIPLTILI AVCVPGNQVL PFGDLATIGF FVAMAVAVHR GNLFRTLISG
VIIMSITLWI ATQTIGLHTQ LAANAGALKA GGMVASMDQG GSPITWLLIQ VFSPQNIPGF
IIIGAIYLTG IFMTWRRARG FIKQEKAVLA E
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