| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0934 |
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| Symbol | |
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| ID | 6142802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 950111 |
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| End bp | 952591 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641615821 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001743013 |
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| Protein GI | 170684280 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGAA TGACCCCACT TGCATCAGCA ATCGTAGCGT TATTGCTCGG CATTGAAGCT
TATGCAGCTG AAGAAACCTT TGATACCCAT TTTATGATAG GTGGAATGAA AGACCAGCAG
GTTGCAAATA TTCGTCTTGA TGATAATCAA CCCTTGCCGG GGCAGTATGA CATCGATATT
TATGTCAATA AGCAATGGCG CGGGAAATAT GAGATTATTG TTAAAGACAA CCCGCAAGAA
ACATGTTTAT CAAGGGAAAT TATCAAGCGG TTAGGCATTA ATACCGATAA CTTTGCCAGC
GGTAAGCAAT GTTTAACATT TGAGCAACTT GTTCAGGGTG GGAGCTATAC CTGGGATATC
GGAGTTTTTC GTCTCGATTT CAGTGTCCCG CAGGCGTGGG TGGAAGAACT GGAAAGTGGC
TATGTTCCAC CGGAAAACTG GGAGCGGGGT ATTAATGCGT TTTATACCTC TTATTATGTG
AGTCAGTATT ACAGCGACTA TAAAGCGTCG GGTAATAGCA AGAGTACATA TGTACGTTTT
AACAGCGGGT TAAACTTACT GGGGTGGCAA CTGCATTCTG ATGCCAGTTT CAGTAAAACA
AATAGCAATC CAGGGGTGTG GAAAAGCAAT ACCCTGTATC TGGAACGTGG ATTTGCCCAA
CTTCTCGGCA CGCTTCGCGT GGGTGATATG TACACATCAA GCGATATTTT TGATTCTGTT
CGCTTCAGCG GTGTGCGGTT GTTTCGTGAT ATGCAGATGT TGCCTAACTC GAAACAGAAT
TTTACGCCAC GGGTGCAGGG GATTGCTCAG AGTAACGCGC TGGTAACTAT TGAACAGAAC
GGTTTTGTGG TTTATCAGAA AGAGGTTCCT CCTGGCCCGT TTGCGATTAC AGATTTGCAG
TTGGCCGGTG GTGGAGCAGA TCTTGATGTC AGCGTGAAAG AGGCGGACGG TTCGGTAACC
ACCTATCTGG TGCCTTATGC AGCGGTGCCG AATATGCTGC AACCCGGCGT GTCGAAATAT
GATTTTGCGG CAGGTCGTAG CCATATTGAA GGGGCGAGCA AACAAAGTGA TTTTGTTCAG
GCGGGTTATC AGTATGGTTT TAATAACTTA TTGACGCTGT ATGGCGGATC GATGGTCGCG
AATAATTATT ACGCGTTCAC TTTGGGGACT GGCTGGAATA CACGCATTGG TGCCATTTCC
GTCGATGCCA CGAAGTCGCA TAGTAAACAA GACAACGGCG ATGTGTTTGA CGGGCAAAGT
TATCAAATTG CCTACAACAA ATTTGTGAGC CAAACGTCGA CGCGTTTTGG TCTGGCGGCC
TGGCGTTATT CGTCGCGTGA TTATCGGACA TTTAATGATC ACGTATGGGC AAACAATAAA
GATAATTATC GCCGTGATGA AAACGATATC TATGACATTG CCGATTATTA CCAGAACGAT
TTTGGCCGTA AAAATAGCTT CTCTGCCAAT ATGAGTCAGT CATTGCCAGA AGGCTGGGGT
TCTGTGTCCT TAAGTACGTT ATGGCGAGAT TACTGGGGGC GTAGCGGCAG CAGTAAGGAT
TATCAGTTGA GTTATTCCAA CAACCTGCGA AGGATAAGCT ATACCCTCGC GGCAAGCCAT
GCTTATGACG AGAATCATCA TGAAGAGAAA CGTTTTAATA TTTTTATATC GATTCCCTTT
GATTGGGGTG ATGACGTTAC GACGCCTCGT CGGCAAATAT ATATGTCTAA CTCAACGACG
TTTGATGATC AGGGGGTTGC CTCAAATAAT ACGGGATTAT CAGGAACCGT TGGAAGCCGG
GATCAGTTTA ACTATGGGGT CAACCTGAGT TATCAGTATC AGGGAAATGA AACGACAGCT
GGGGCGAATT TAACCTGGAA CGCGCCGGTT GCGACAGTGA ATGGCAGTTA TAGTCAGTCG
AGTGCTTATC GACAGGCTGG AGCCAGTGTT TCAGGGGGCA TTGTCGCCTG GTCGGGTGGC
GTTAATCTGG CAAACCGTCT TTCTGAAACG TTTGCTGTGA TGAATGCGCC AGGAATTAAA
GATGCTTATG TCAATGGGCA AAAATATCGC ACAACAAACC GTAATGGAGT GGTGGTATAC
GACGGAATGA CACCTTATCG GGAAAATTAC CTGATGTTGG ATGTGTCACA AAGCGATAGC
GAAGCAGAAT TACGTGGCAA CCGGAAAATT GCCGCCCCTT ATCGCGGCGC GGTTGTACTG
GTTAATTTTG ATACCGATCA GCGCAAGCCA TGGTTTATAA AAGCGTTAAG AGCGGATGGG
CAACCATTAA CGTTTGGTTA TGAAGTCAAT GATATCCATG GTCATAATAT TGGTGTTGTC
GGCCAGGGAA GCCAGTTATT TATTCGCACC AATGAAGTAC CGCCATCGGT TAATGTAGCA
ATTGATAAGC AACAAGGACT TTCATGCACA ATCACCTTCG GTAAAGAGAT TGATGAAAGT
AGAAATTATA TTTGCCAGTA A
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| Protein sequence | MLRMTPLASA IVALLLGIEA YAAEETFDTH FMIGGMKDQQ VANIRLDDNQ PLPGQYDIDI
YVNKQWRGKY EIIVKDNPQE TCLSREIIKR LGINTDNFAS GKQCLTFEQL VQGGSYTWDI
GVFRLDFSVP QAWVEELESG YVPPENWERG INAFYTSYYV SQYYSDYKAS GNSKSTYVRF
NSGLNLLGWQ LHSDASFSKT NSNPGVWKSN TLYLERGFAQ LLGTLRVGDM YTSSDIFDSV
RFSGVRLFRD MQMLPNSKQN FTPRVQGIAQ SNALVTIEQN GFVVYQKEVP PGPFAITDLQ
LAGGGADLDV SVKEADGSVT TYLVPYAAVP NMLQPGVSKY DFAAGRSHIE GASKQSDFVQ
AGYQYGFNNL LTLYGGSMVA NNYYAFTLGT GWNTRIGAIS VDATKSHSKQ DNGDVFDGQS
YQIAYNKFVS QTSTRFGLAA WRYSSRDYRT FNDHVWANNK DNYRRDENDI YDIADYYQND
FGRKNSFSAN MSQSLPEGWG SVSLSTLWRD YWGRSGSSKD YQLSYSNNLR RISYTLAASH
AYDENHHEEK RFNIFISIPF DWGDDVTTPR RQIYMSNSTT FDDQGVASNN TGLSGTVGSR
DQFNYGVNLS YQYQGNETTA GANLTWNAPV ATVNGSYSQS SAYRQAGASV SGGIVAWSGG
VNLANRLSET FAVMNAPGIK DAYVNGQKYR TTNRNGVVVY DGMTPYRENY LMLDVSQSDS
EAELRGNRKI AAPYRGAVVL VNFDTDQRKP WFIKALRADG QPLTFGYEVN DIHGHNIGVV
GQGSQLFIRT NEVPPSVNVA IDKQQGLSCT ITFGKEIDES RNYICQ
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