Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0918 |
Symbol | |
ID | 6145172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 926077 |
End bp | 927762 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615806 |
Product | sensor histidine kinase |
Protein accession | YP_001742998 |
Protein GI | 170681525 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.817517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGATT TTAATCTGGT GTTGCTGCTG CTTCAGCAGA TGTGCGTTTT TTTAGTCATT GCGTGGTTAA TGAGTAAAAC GCCATTATTC ATACCGCTAA TGCAGGTCAC GGTTCGTCTG CCGCATAAAT TTCTCTGCTA CATCGTCTTT TCCATCTTCT GCATCATGGG CACCTGGTTT GGGTTGCACA TTGACGATTC TATTGCCAAT ACCCGTGCGA TAGGCGCGGT AATGGGCGGC TTACTCGGCG GTCCGGTCGT CGGTGGGCTG GTTGGTCTGA CCGGCGGGTT ACATCGATAT TCGATGGGGG GCATGACCGC GCTAAGTTGC ATGATCTCGA CCATCGTTGA AGGATTGCTC GGCGGCCTGG TACACAGCAT CCTGATCCGT CGCGGGCGCA CTGATAAAGT CTTTAACCCC ATTACCGCCG GTGCCGTCAC GTTCGTCGCT GAAATGGTGC AAATGTTGAT CATCCTGGCG ATCGCCCGAC CTTATGAAGA TGCGGTGCGT CTGGTGAGTA ATATTGCTGC GCCAATGATG GTCACCAATA CCGTCGGCGC GGCACTGTTT ATGCGTATAT TGCTCGATAA ACGCGCGATG TTTGAAAAAT ACACTTCGGC TTTTTCTGCC ACTGCGCTGA AAGTGGCGGC CTCGACGGAA GGCATTTTGC GCCAGGGGTT TAACGAAGAG AACAGCATGA AAGTGGCACA GGTGCTGTAT CAGGAGCTGG ATATTGGTGC AGTCGCGATT ACCGATCGAG AGAAATTGCT GGCCTTTACC GGAATTGGTG ACGACCACCA TTTACCCGGC AAACCGATTT CTTCAACTTA TACCTTAAAA GCGATTGAAA CCGGTGAAGT GGTCTACGCT GATGGCAACG AAGTGCCTTA CCGTTGCTCT TTGCATCCGC AATGCAAACT GGGGTCGACG CTGGTCATTC CGTTGCGTGG TGAAAATCAG CGAGTGATGG GTACCATCAA ATTGTATGAA GCCAAAAACC GTTTATTCAG TTCAATCAAC CGCACGCTGG GCGAGGGGAT TGCGCAACTG CTTTCGGCGC AGATCCTCGC CGGGCAATAT GAGCGGCAAA AAGCGATGCT CACCCAGTCA GAGATCAAAC TGCTTCACGC CCAGGTGAAT CCCCATTTTT TGTTTAATGC GCTTAACACC ATTAAAGCGG TGATCCGCCG CGACAGCGAA CAGGCCAGCC AGCTGGTGCA GTATCTTTCC ACTTTTTTCC GCAAAAACTT AAAGCGGCCT TCGGAGTTTG TTACTCTCGC CGACGAAATT GAACATGTGA ACGCTTATCT GCAAATTGAA AAGGCGCGCT TCCAGTCGCG GTTGCAGGTC AACATTGCTA TTCCGCAAGA ATTATCCCAG CAGCAATTGC CCGCGTTTAC CCTGCAACCG ATAGTGGAAA ACGCCATTAA ACATGGGACA TCACAACTGC TGGATACAGG GCGAGTGGCA ATCAGCGCCC GACGTGAGGG GCAACATTTG ATGCTGGAGA TCGAAGACAA TGCAGGTTTG TATCAACCGG TAACCAATGC CAGTGGGCTG GGGATGAATC TGGTGGATAA GCGTTTACGT GAACGGTTTG GCGATGACTA TGGGATAAGC GTCGCCTGTG AGCCTGATAG TTACACCCGA ATAACGTTAC GACTACCATG GAGGGACGAG GCATGA
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Protein sequence | MYDFNLVLLL LQQMCVFLVI AWLMSKTPLF IPLMQVTVRL PHKFLCYIVF SIFCIMGTWF GLHIDDSIAN TRAIGAVMGG LLGGPVVGGL VGLTGGLHRY SMGGMTALSC MISTIVEGLL GGLVHSILIR RGRTDKVFNP ITAGAVTFVA EMVQMLIILA IARPYEDAVR LVSNIAAPMM VTNTVGAALF MRILLDKRAM FEKYTSAFSA TALKVAASTE GILRQGFNEE NSMKVAQVLY QELDIGAVAI TDREKLLAFT GIGDDHHLPG KPISSTYTLK AIETGEVVYA DGNEVPYRCS LHPQCKLGST LVIPLRGENQ RVMGTIKLYE AKNRLFSSIN RTLGEGIAQL LSAQILAGQY ERQKAMLTQS EIKLLHAQVN PHFLFNALNT IKAVIRRDSE QASQLVQYLS TFFRKNLKRP SEFVTLADEI EHVNAYLQIE KARFQSRLQV NIAIPQELSQ QQLPAFTLQP IVENAIKHGT SQLLDTGRVA ISARREGQHL MLEIEDNAGL YQPVTNASGL GMNLVDKRLR ERFGDDYGIS VACEPDSYTR ITLRLPWRDE A
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