Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0910 |
Symbol | pbpG |
ID | 6144390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 915800 |
End bp | 916741 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615798 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_001742990 |
Protein GI | 170679983 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.824337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.342454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATCA TGCCGAAATT TCGAGTTTCT TTATTTAGCC TGGCCCTGAT GCTGGCTGTG CCTTTTGCAC CGCAGGCCGT TGCGAAAACG GCAGCCGCTA CCACCGCGTC ACAACCGGAA ATTGCCTCCG GTAGCGCGAT GATTGTTGAT CTGAATACCA ACAAAGTGAT CTATTCGAAC CACCCGGATC TGGTGCGTCC GATTGCGTCT ATCAGCAAAT TAATGACCGC GATGGTTGTG CTGGATGCAC GACTGCCGCT GGATGAAAAA CTAAAAGTGG ATATCAGCCA GACGCCGGAG ATGAAAGGGG TCTATTCGCG CGTACGACTG AACAGCGAAA TCAGCCGTAA AGATATGCTG TTGCTGGCGC TGATGTCTTC AGAAAACCGC GCGGCGGCAA GCCTTGCGCA CCATTATCCC GGTGGTTACA AAGCCTTTAT TAAGGCAATG AATGCGAAAG CGAAATCGCT CGGAATGAAC AACACGCGCT TTGTTGAACC TACCGGATTG TCGGTGCATA ACGTTTCAAC TGCCCGTGAC TTAACCAAAC TGCTCATTGC CAGCAAACAA TATCCGTTGA TCGGGCAGTT AAGTACCACC CGGGAAGATA TGGCAACCTT CTCTAACCCG ACGTATACGC TGCCGTTCCG CAATACTAAC CATCTGGTGT ATCGCGATAA CTGGAATATT CAGTTAACCA AAACCGGCTT TACCAATGCG GCGGGCCATT GTCTGGTGAT GCGTACGGTT ATCAATAATA AACCGGTGGC GCTGGTAGTA ATGGACGCGT TTGGCAAATA TACCCATTTT GCCGATGCCA GCCGCCTGCG TACCTGGATT GAGACCGGTA AAGTGATGCC TGTTCCGGCA GCAGCGTTGA GCTATAAAAA ACAAAAAGCC GCCCAGATGG CGGCGGCGGG GCAGACGGCG CAGAACGATT AA
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Protein sequence | MLIMPKFRVS LFSLALMLAV PFAPQAVAKT AAATTASQPE IASGSAMIVD LNTNKVIYSN HPDLVRPIAS ISKLMTAMVV LDARLPLDEK LKVDISQTPE MKGVYSRVRL NSEISRKDML LLALMSSENR AAASLAHHYP GGYKAFIKAM NAKAKSLGMN NTRFVEPTGL SVHNVSTARD LTKLLIASKQ YPLIGQLSTT REDMATFSNP TYTLPFRNTN HLVYRDNWNI QLTKTGFTNA AGHCLVMRTV INNKPVALVV MDAFGKYTHF ADASRLRTWI ETGKVMPVPA AALSYKKQKA AQMAAAGQTA QND
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