Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0905 |
Symbol | |
ID | 6145937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 911930 |
End bp | 913366 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615793 |
Product | multidrug resistance outer membrane protein MdtQ |
Protein accession | YP_001742985 |
Protein GI | 170681074 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.601202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.184806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTG ATTCTTTTTA TCCAGCCATC GCCTGTTTTC CGCTGTTACT GATGCTGGCC GGGTGTGCGC CTATGCATGA AACCCGCCAG GAGTTAAGCC AGCAAACACC CGCGGCACAA GTTGACACCG CATTACCCAC GGCGCTGAAA AATGGTTGGC CAGACAGCCA ATGGTGGCTG GAGTATCACG ATAATCAACT CACTTCATTA ATTAACAATG CACTACAGAA CGCACCGGAT ATGCAGGTGG CTGAACAGCG CATTCAGCTG GCTGAAGCCC AGGCGAAGGC AGTTGCCACT CAGGATGGTC CGCAGCTCGA CTTTTCTGCG GATATGGAGC GGCAAAAAAT GTCGGCAGAA GGGTTAATGG GGCCGTTTGC TTTGAACGAT CCGGCCGCAG GTACGACCGG TCCGTGGTAC ACCAACGGTA CTTTTGGCTT AACGGCGGGC TGGCATCTCG ATATCTGGGG AAAGAATCGG GCGGAGGTAA CTGCTCGCCT GGGTACGGTT AAAGCACGGG TGGCGGAACG CGAGCAAACC CGCCAATTGC TGGCTGGCAG CGTAGCCCGC CTGTACTGGG AGTGGCAAAC CCAGGCGGCG TTAAACACGG TCTTGCAGCA AATCGAAAAA GAGCAGAACA CCCTTATCGT GACCGATCGC CAGCTATATC AGAACGGGAT TACTTCTTCA GTTGAAGGTG TGGAAACCGA TATTAATGCC AGCAAAACCC GGCAGCAGCT CAACGATGTC GCGGGGAAAA TGAAAATTAT TGAGGCACGG TTAAGTGCGC TCACCAACCA CCAGACAAAG TCATTGAAGC TTAAACCGGT CGCGTTGCCG AAAGTGGCAA GTCAGCTTCC TGATGAACTC GGGTACTCCT TACTGGCCCG GCGGGCAGAT TTGCAGGCGG CGCACTGGTA CGTTGAGTCA TCGTTAAGCA CTATTGATGC GGCAAAAGCG GCATTTTATC CTGACATCAA CCTGATGGCC TTTCTGCAAC AGGATGCGTT GCACTTAAGC GATCTGTTCC GTCATTCCGC GCAGCAAATG GGCGTTACGG CAGGCCTGAC GCTACCCATT TTCGATAGTG GTCGTCTTAA CGCCAATCTC GATATCGCAA AAGCCGAAAG CAACTTGTCT ATCGCCAGCT ACAACAAAGC GGTGGTTGAA GCGGTGAATG ACGTGGCGCG GGCAGCCAGT CAGGTTCAGA CACTGGCGGA GAAAAACCAG CATCAGGCGC AAATTGAGCG CGATGCCTTA CGTGTGGTAG GTCTTGCGCA GGCCCGCTTT AACGCGGGTA TCATTGCCGG TTCCCGCGTC AGCGAAGCCA GGATCCCGGC GCTGCGTGAG CGGGCCAATG GCCTGTTATT GCAAGGGCAG TGGCTGGATG CCTCCATTCA ACTCACTGGT GCGTTGGGCG GGGGTTACAA ACGCTGA
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Protein sequence | MNRDSFYPAI ACFPLLLMLA GCAPMHETRQ ELSQQTPAAQ VDTALPTALK NGWPDSQWWL EYHDNQLTSL INNALQNAPD MQVAEQRIQL AEAQAKAVAT QDGPQLDFSA DMERQKMSAE GLMGPFALND PAAGTTGPWY TNGTFGLTAG WHLDIWGKNR AEVTARLGTV KARVAEREQT RQLLAGSVAR LYWEWQTQAA LNTVLQQIEK EQNTLIVTDR QLYQNGITSS VEGVETDINA SKTRQQLNDV AGKMKIIEAR LSALTNHQTK SLKLKPVALP KVASQLPDEL GYSLLARRAD LQAAHWYVES SLSTIDAAKA AFYPDINLMA FLQQDALHLS DLFRHSAQQM GVTAGLTLPI FDSGRLNANL DIAKAESNLS IASYNKAVVE AVNDVARAAS QVQTLAEKNQ HQAQIERDAL RVVGLAQARF NAGIIAGSRV SEARIPALRE RANGLLLQGQ WLDASIQLTG ALGGGYKR
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