| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0900 |
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| Symbol | poxB |
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| ID | 6145667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 904230 |
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| End bp | 905948 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615788 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001742980 |
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| Protein GI | 170679672 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.84426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA CGGTTGCAGC ATATATCGCC AAAACACTCG AATCGGCAGG CGTGAAACGC
ATCTGGGGAG TCACGGGCGA CTCTCTGAAC GGTCTTAGCG ACAGTCTTAA TCGCATGGGC
ACCATCGAGT GGATGTCCAC CCGGCATGAA GAAGTGGCGG CGTTTGCCGC TGGCGCTGAA
GCACAACTTA GCGGAGAACT GGCGGTCTGT GCCGGATCGT GCGGTCCCGG TAACCTGCAC
TTAATCAACG GCCTGTTCGA TTGCCACCGC AATCACGTTC CGGTACTGGC GATTGCCGCT
CATATTCCCT CCAGCGAAAT TGGCAGCGGC TATTTCCAGG AAACCCACCC ACAAGAGTTA
TTCCGCGAAT GTAGTCACTA TTGCGAGCTG GTTTCCAGCC CGGAGCAGAT CCCACAAGTG
CTGGCAATTG CTATGCGCAA AGCAGTGCTA AACCGTGGCG TTTCCGTTGT CGTGTTACCG
GGCGACGTGG CGTTAAAACC TGCACCAGAA GGGGCAACTA CCCACTGGTA TCATGCGCCA
CAGCCAGTCG TGACGCCGGA AGAAGAAGAG TTACGCAAAC TGGCGCAACT GCTGCGTTAC
TCCAGCAATA TCGCCCTGAT GTGCGGCAGT GGCTGCGCGG GGGCGCATAA AGAGTTAGTT
GAGTTTGCCG GGAAAATTAA AGCGCCTATT GTTCATGCCC TGCGCGGTAA AGAGCATGTC
GAATACGATA ATCCGTATGA TGTCGGAATG ACGGGATTAA TCGGCTTCTC GTCAGGTTTC
CATACCATGA TGAATGCCGA TACGTTAGTG CTGCTCGGCA CGCAATTTCC CTACCGCGCG
TTCTACCCGA CCGATGCCAA AATTATTCAG ATTGATATCA ACCCAGCCAG CATCGGCGCG
CATAGCAAGG TAGATATGGC GCTGGTCGGC GATATCAAAT CAACCCTGCG GGCATTGCTG
CCACTGGTGG AAGAAAAAAC CGATCGCAAG TTTCTGGATA AAGCGCTGGA AGATTACCGC
GACGCCCGCA AAGGGCTGGA TGATTTAGCT AAACCGAGCG AGAAAGCCAT TCACCCGCAA
TATCTGGCGC AGCAAATTAG TCATTTTGCC GCCGATGACG CCATCTTTAC CTGTGACGTT
GGTACGCCAA CGGTGTGGGC GGCACGTTAT CTGAAAATGA ACGGCAAGCG TCGTCTGTTA
GGTTCGTTTA ACCACGGTTC GATGGCTAAC GCCATGCCGC AGGCGCTGGG TGCGCAGGCA
ACCGAGCCGG AACGTCAGGT GGTCGCCATG TGCGGCGATG GCGGTTTCAG TATGTTGATG
GGCGATTTCC TCTCAGTAAT GCAGATGAAA TTGCCAGTGA AAATTATCGT CTTTAATAAC
AGCGTGCTGG GCTTTGTGGC GATGGAGATG AAAGCCGGAG GCTACCTGAC AGACGGTACT
GAGCTGCACG ACACCAACTT TGCCCGCATT GCCGAAGCGT GCGGAATTAC GGGTATTCGC
GTGGAAAAAG CCTCTGAAGT CGATGAAGCC CTGCAACGCG CCTTTTCCAT CGACGGTCCG
GTGTTGGTGG ATGTGGTAGT AGCCAAAGAA GAGTTAGCCA TTCCACCGCA GATCAAACTT
GAACAGGCCA AAGGATTTAG CTTGTATATG TTGCGCGCAA TCATCAGCGG ACGCGGTGAT
GAAGTGATCG AACTGGCGAA AACGAACTGG CTAAGGTAA
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| Protein sequence | MKQTVAAYIA KTLESAGVKR IWGVTGDSLN GLSDSLNRMG TIEWMSTRHE EVAAFAAGAE
AQLSGELAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA HIPSSEIGSG YFQETHPQEL
FRECSHYCEL VSSPEQIPQV LAIAMRKAVL NRGVSVVVLP GDVALKPAPE GATTHWYHAP
QPVVTPEEEE LRKLAQLLRY SSNIALMCGS GCAGAHKELV EFAGKIKAPI VHALRGKEHV
EYDNPYDVGM TGLIGFSSGF HTMMNADTLV LLGTQFPYRA FYPTDAKIIQ IDINPASIGA
HSKVDMALVG DIKSTLRALL PLVEEKTDRK FLDKALEDYR DARKGLDDLA KPSEKAIHPQ
YLAQQISHFA ADDAIFTCDV GTPTVWAARY LKMNGKRRLL GSFNHGSMAN AMPQALGAQA
TEPERQVVAM CGDGGFSMLM GDFLSVMQMK LPVKIIVFNN SVLGFVAMEM KAGGYLTDGT
ELHDTNFARI AEACGITGIR VEKASEVDEA LQRAFSIDGP VLVDVVVAKE ELAIPPQIKL
EQAKGFSLYM LRAIISGRGD EVIELAKTNW LR
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