| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0897 |
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| Symbol | amiD |
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| ID | 6147397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 899812 |
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| End bp | 900642 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641615784 |
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| Product | N-acetylmuramoyl-L-alanine amidase AmiD |
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| Protein accession | YP_001742976 |
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| Protein GI | 170682080 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGAG TCTTCTGGCT GGTCGCCGCC GCTCTGTTAC TGGCAGGGTG TGCAGGCGAA
AAGGGCATTG TCGAGAAAGA GGGATATCAG CTTGATACCC GACGCCAGGC GCAGGCGGCG
TATCCGCGCA TTAAAGTGAT GGTTATCCAC TACACCGCAG ATGATTTTGA TAGCTCGCTG
GCGACACTGA CCGACAAGCA GGTCAGCTCG CATTATCTGG TCCCTGCGGT GCCACCGCGA
TACAACGGTA AACCGCGCAT CTGGCAACTG GTGCCGGAAC AGGAACTGGC CTGGCATGCG
GGGATTAGCG CCTGGCGCGG GGCAACGCGC CTTAACGACA CCTCTATTGG CATTGAGCTG
GAAAACCGTG GCTGGCAGAA ATCAGCCGGA GTGAAATATT TTGCCCCGTT TGAACCGGCA
CAGATTCAGG CGCTTATTCC ACTGGCGAAA GATATTATTG CCCGTTATCA CATCAAGCCG
GAAAACGTAG TGGCACATGC GGATATCGCC CCGCAGCGCA AAGACGATCC GGGGCCATTA
TTTCCCTGGC AGCAACTGGC GCAGCAGGGG ATTGGTGCCT GGCCGGATGC GCAGCGGGTG
AACTTTTACC TTGCCGGGCG CGCGCCGCAC ACACCGGTAG ATACCGCGTC ATTGCTGGAG
CTTTTGGCGC GCTACGGTTA TGACGTTAAA CCTGATATGA CACCGCGCGA GCAGCGGCGC
GTGATTATGG CGTTCCAGAT GCATTTCCGC CCGACGTTAT ACAACGGCGA AGCGGATGCA
GAAACTCAGG CGATTGCCGA AGCGTTGCTG GAGAAATACG GGCAGGATTA G
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| Protein sequence | MRRVFWLVAA ALLLAGCAGE KGIVEKEGYQ LDTRRQAQAA YPRIKVMVIH YTADDFDSSL
ATLTDKQVSS HYLVPAVPPR YNGKPRIWQL VPEQELAWHA GISAWRGATR LNDTSIGIEL
ENRGWQKSAG VKYFAPFEPA QIQALIPLAK DIIARYHIKP ENVVAHADIA PQRKDDPGPL
FPWQQLAQQG IGAWPDAQRV NFYLAGRAPH TPVDTASLLE LLARYGYDVK PDMTPREQRR
VIMAFQMHFR PTLYNGEADA ETQAIAEALL EKYGQD
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