Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0867 |
Symbol | deoR |
ID | 6145988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 874608 |
End bp | 875366 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641615755 |
Product | DNA-binding transcriptional repressor DeoR |
Protein accession | YP_001742947 |
Protein GI | 170680830 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAC GTCGCGAAGA GCGTATCGGG CAGCTGCTGC AAGAATTAAA ACGCAGCGAT AAGTTACATC TTAAAGACGC CGCCGCCCTG CTTGGGGTTT CGGAGATGAC GATTCGTCGC GATCTGAACA ACCACAGTGC GCCCGTCGTT TTGCTCGGCG GCTATATTGT TCTGGAACCG CGCAGTGCCA GCCATTACCT GTTAAGCGAT CAAAAATCCC GCCTGGTGGA AGAAAAACGC CGGGCGGCAA AACTGGCTGC GACGATGGTA GAACCCGATC AGACCCTCTT TTTTGACTGT GGCACCACCA CACCGTGGAT TATTGAAGCG ATTGATAATG AAATCCCTTT TACCGCCGTT TGTTATTCGC TAAATACCTT TCTGGCGCTG AAAGAGAAAC CTCATTGCCG CGCGTTTCTG TGTGGTGGTG AATTTCACGC CAGCAACGCC ATTTTCAAAC CCATCGATTT TCAGCAAACG CTGAATAATT TTTGCCCGGA TATCGCTTTT TATTCTGCGG CGGGCGTGCA TGTCAGTAAA GGCGCTACCT GTTTTAATCT TGAAGAGTTG CCGGTAAAAC ACTGGGCCAT GTCGATGGCG CAAAAGCATG TGCTGGTTGT CGACCACAGT AAATTTGGCA AGGTGCGTCC GGCGCGCATG GGTGACCTGA AACGCTTTGA TATTGTTGTG AGCGATTGTT GCCCGGAAGA TGAGTATGTG AAGTACGCGC AGACGCAGCG TATTAAGTTG ATATATTAA
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Protein sequence | METRREERIG QLLQELKRSD KLHLKDAAAL LGVSEMTIRR DLNNHSAPVV LLGGYIVLEP RSASHYLLSD QKSRLVEEKR RAAKLAATMV EPDQTLFFDC GTTTPWIIEA IDNEIPFTAV CYSLNTFLAL KEKPHCRAFL CGGEFHASNA IFKPIDFQQT LNNFCPDIAF YSAAGVHVSK GATCFNLEEL PVKHWAMSMA QKHVLVVDHS KFGKVRPARM GDLKRFDIVV SDCCPEDEYV KYAQTQRIKL IY
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