| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0838 |
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| Symbol | ompX |
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| ID | 6143572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 842129 |
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| End bp | 842644 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615726 |
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| Product | outer membrane protein X |
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| Protein accession | YP_001742918 |
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| Protein GI | 170681552 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.202918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCATGTCT TTCAGCACTG GCCGCAGTTC TGGCTTTCAC CGCAGGTACT
TCCGTAGCTG CGACTTCTAC TGTAACTGGC GGTTACGCAC AGAGCGACGC TCAGGGCCAA
ATGAACAAAA TGGGCGGTTT CAACCTGAAA TACCGCTATG AAGAAGACAA CAGCCCGCTG
GGTGTGATCG GTTCTTTCAC TTACACCGAG AAAAGCCGTA CTGCAAGCTC TGGTGACTAC
AACAAAAACC AGTACTACGG CATCACTGCT GGTCCGGCTT ACCGCATTAA CGACTGGGCA
AGCATCTACG GTGTAGTGGG TGTGGGTTAT GGTAAATTCC AGACCACTGA ATACCCGACC
TACAAACACG ACACCAGCGA CTACGGTTTC TCCTACGGTG CTGGTCTGCA GTTCAACCCG
ATGGAAAACG TTGCTCTGGA CTTCTCTTAC GAGCAGAGCC GTATTCGTAG CGTTGACGTA
GGCACCTGGA TTGCCGGTGT TGGTTACCGC TTCTAA
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| Protein sequence | MKKIACLSAL AAVLAFTAGT SVAATSTVTG GYAQSDAQGQ MNKMGGFNLK YRYEEDNSPL
GVIGSFTYTE KSRTASSGDY NKNQYYGITA GPAYRINDWA SIYGVVGVGY GKFQTTEYPT
YKHDTSDYGF SYGAGLQFNP MENVALDFSY EQSRIRSVDV GTWIAGVGYR F
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