Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0816 |
Symbol | |
ID | 6143129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 817815 |
End bp | 818948 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615704 |
Product | ABC-2 type transporter, permease protein |
Protein accession | YP_001742896 |
Protein GI | 170679866 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.658285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATC CGATCCTGTC CTGGCGTCGC GTGCGGGCAC TGTGCGTCAA AGAGACGCGG CAGATCGTTC GCGATCCGAG TAGCTGGCTG ATTGCGGTAG TGATCCCACT GCTACTGCTG TTTATTTTTG GATACGGCAT TAACCTCGAC TCCAGCAAGC TGCGGGTCGG GATATTGCTG GAACAGCGTA GCGAAGCGGC GCTGGATTTC ACCCACACCA TGACCGGTTC GCCCTACATC GACGCCACCA TCAGCGATAA CCGTCAGGAA CTGATCGCCA AAATGCAGGC GGGGAAAATT CGCGGTCTGG TGGTTATTCC CGTGGATTTC GCCGAACAGA TGGAGCGCGC CAGCGCCACC GCACCGATTC AGGTGATCAC CGACGGCAGT GAGCCGAATA CCGCTAACTT TGTGCAGGGG TATGTCGAAG GGATCTGGCA GATCTGGCAA ATGCAGCGAG CGGAGGATAA CGGGCAGACT TTTGAACCGC TTATTGATGT ACAAACCCGC TACTGGTTTA ACCCGGCGGC GATTAGCCAG CACTTTATTA TCCCCGGTGC GGTGACCATT ATCATGACGG TCATCGGCGC GATTCTCACC TCGCTGGTGG TGGCGCGAGA ATGGGAACGC GGCACCATGG AGGCTCTGCT CTCTACGGAG ATTACCCGCA CGGAACTGCT ACTGTGTAAG CTGATCCCTT ATTATTTTCT CGGGATGCTG GCGATGCTGC TGTGTATGCT GGTGTCAGTG TTTATTCTCG GCGTGCCGTA TCGTGGGTCA CTGCTGATTC TGTTTTTTAT CTCCAGCCTG TTTTTACTCA GTACCCTGGG GATGGGGCTG CTGATTTCCA CGATTACCCG CAACCAGTTC AATGCCGCTC AGGTCGCTCT GAACGCGGCT TTTCTGCCGT CGATTATGCT TTCCGGCTTT ATATTTCAGA TAGACAGTAT GCCCGCGGTG ATCCGCGCGG TGACGTACAT TATTCCCGCA CGTTATTTCG TCAGCACCCT GCAAAGCCTG TTCCTCGCCG GGAATATTCC GGTGGTACTG GTGGTGAACG TGCTGTTTTT GATCGCTTCG GCGGTGATGT TTATCGGCCT GACGTGGCTG AAAACCAAAC GTCGGCTGGA TTAG
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Protein sequence | MSNPILSWRR VRALCVKETR QIVRDPSSWL IAVVIPLLLL FIFGYGINLD SSKLRVGILL EQRSEAALDF THTMTGSPYI DATISDNRQE LIAKMQAGKI RGLVVIPVDF AEQMERASAT APIQVITDGS EPNTANFVQG YVEGIWQIWQ MQRAEDNGQT FEPLIDVQTR YWFNPAAISQ HFIIPGAVTI IMTVIGAILT SLVVAREWER GTMEALLSTE ITRTELLLCK LIPYYFLGML AMLLCMLVSV FILGVPYRGS LLILFFISSL FLLSTLGMGL LISTITRNQF NAAQVALNAA FLPSIMLSGF IFQIDSMPAV IRAVTYIIPA RYFVSTLQSL FLAGNIPVVL VVNVLFLIAS AVMFIGLTWL KTKRRLD
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