| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0730 |
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| Symbol | nei |
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| ID | 6146476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 735503 |
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| End bp | 736294 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615619 |
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| Product | endonuclease VIII |
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| Protein accession | YP_001742818 |
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| Protein GI | 170683193 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.307896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.698141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAG GCCCGGAGAT CCGCCGTGCA GCGGATAACC TGGAGGCGGC GATCAAAGGC
AAACCACTAA CTGATGTCTG GTTTGCCTTC CCGCAGTTAA AATCTTATCA ATCACGACTT
ATCGGTCAAC ACGTTACCCA TGTGGAAACG CGTGGTAAGG CGTTGTTAAC TCATTTTTCC
AACGACTTAA CGCTCTACAG CCATAATCAG CTTTACGGCG TCTGGCGCGT GGTTGAAACC
GGCGAAGAGC CGCAGACCAC GCGAGTATTG CGGGTAAAAC TGCAAACGGC TGACAAAACC
ATTCTGCTTT ATAGCGCCTC GGATATTGAG ATGTTGACCC CGGAACAACT GACCACGCAT
CCGTTTTTAC AACGCGTTGG TCCCGATGTG CTGGATCCGA AACTGACGCC GGAGGTGGCG
AAAGAACGGT TATTGTCGCC GCGCTTTCGT AACCGTCAGT TTGCTGGATT ACTGCTCGAT
CAGGCGTTTC TGGCAGGACT TGGCAATTAT TTGCGGGTGG AGATCCTCTG GCAGGTTGGG
TTGACCGGAA ATCATAAAGC GAAAGATCTC AATGCGGCGC AACTGGACGC ACTCGCACAC
GCGTTACTGG ATATTCCGCG ACTTTCTTAC GCTACGCGGG GGCAGGTGGA TGAAAACAAA
TATCATGGGG CGCTGTTTCG CTTTAAGGTT TTTCATCGTG ATGGCGAACC TTGCGAACGC
TGTGGCGGCA TCATTGAGAA AACCACGCTG TCATCGCGCC CGTTTTACTG GTGCCCTGGC
TGCCAGCACT AG
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| Protein sequence | MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF PQLKSYQSRL IGQHVTHVET RGKALLTHFS
NDLTLYSHNQ LYGVWRVVET GEEPQTTRVL RVKLQTADKT ILLYSASDIE MLTPEQLTTH
PFLQRVGPDV LDPKLTPEVA KERLLSPRFR NRQFAGLLLD QAFLAGLGNY LRVEILWQVG
LTGNHKAKDL NAAQLDALAH ALLDIPRLSY ATRGQVDENK YHGALFRFKV FHRDGEPCER
CGGIIEKTTL SSRPFYWCPG CQH
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