Gene EcSMS35_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0725 
Symbol 
ID6146616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp732395 
End bp733138 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content54% 
IMG OID641615615 
Productputative hydrolase-oxidase 
Protein accessionYP_001742814 
Protein GI170682961 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.80137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.44707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CCGAACTGGA ACAACTGATT AACGAAAAAC TGAACAGCGC GGCGATTAGT 
GATTACGCGC CGAATGGTTT GCAGGTGGAA GGCAAAGAGA CGGTGCAAAA AATTGTTACC
GGTGTCACTG CCAGCCAGGC TTTGCTCGAT GAGGCAGTGC GTCTGGGCGC GGATGCGGTC
ATTGTGCATC ATGGCTACTT CTGGAAAGGT GAATCTCCGG TCATTCGCGG AATGAAGCGT
AACCGTTTAA AAACGTTGCT GGCGAATGAT ATCAACCTGT ATGGCTGGCA TCTGCCCCTG
GACGCGCATC CGGAGCTGGG TAATAACGCA CAACTGGCGG CGTTACTGGG GATCACGGTC
ATGGGCGAAA TTGAGCCGTT GGTGCCGTGG GGCGAACTGA CCATGCCTGT GCCGGGACTG
GAACTGGCCT CCTGGATTGA AGCGCGTCTG GGACGTAAGC CGTTATGGTG TGGCGATACC
GGACCTGAGG TGGTCCAGCG CGTTGCCTGG TGCACGGGCG GCGGGCAAAG TTTTATCGAT
AGCGCCGCGC GTTTTGGCGT GGATGCTTTT ATTACTGGCG AAGTTTCTGA ACAGACCATT
CATTCAGCCC GCGAGCAGGG ATTGCATTTT TATGCTGCGG GTCACCATGC CACTGAACGT
GGTGGTATTC GCGCGTTGAG CGAGTGGCTG AATGAAAATA CCGATCTTGA TGTGACCTTT
ATTGATATTC CTAATCCTGC ATAA
 
Protein sequence
MKNTELEQLI NEKLNSAAIS DYAPNGLQVE GKETVQKIVT GVTASQALLD EAVRLGADAV 
IVHHGYFWKG ESPVIRGMKR NRLKTLLAND INLYGWHLPL DAHPELGNNA QLAALLGITV
MGEIEPLVPW GELTMPVPGL ELASWIEARL GRKPLWCGDT GPEVVQRVAW CTGGGQSFID
SAARFGVDAF ITGEVSEQTI HSAREQGLHF YAAGHHATER GGIRALSEWL NENTDLDVTF
IDIPNPA