Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0714 |
Symbol | potE |
ID | 6145530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 716182 |
End bp | 717501 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615604 |
Product | putrescine transporter |
Protein accession | YP_001742803 |
Protein GI | 170683462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0136028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.578449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA CTAAATCGAA CAAGATGGGC GTCGTTCAGT TAACCATACT GACGATGGTC AACATGATGG GCTCCGGTAT CATCATGCTG CCGACAAAGC TTGCCGAAGT TGGGACAATC TCAATTATCT CCTGGCTGGT GACAGCCGTA GGCTCAATGG CACTGGCGTG GGCATTCGCA AAATGCGGTA TGTTCAGCCG TAAGGCAGGT GGTATGGGCG GTTATGCGGA GTATGCTTTC GGTAAATCCG GTAACTTTAT GGCGAACTAC ACCTACGGTG TCTCGCTGCT GATTGCTAAC GTCGCGATTG CTATTTCGGC GGTTGGTTAC GGCACCGAAC TGCTCGGCGC GAGTTTGTCG CCAGTGCAGA TTGGTCTTGC GACCATCGGG GTGCTGTGGA TTTGTACCGT GGCTAACTTC GGTGGTGCGC GCATTACCGG GCAAATCAGT AGCATTACTG TGTGGGGGGT AATCATTCCG GTCGTCGGTC TGTGCATTAT CGGCTGGTTC TGGTTTAGCC CGACGCTGTA CGCTAACTCA TGGAACCCTC ATCATGTACC GTTCTTTAGC GCTGTAGGTT CCTCCATCGC CATGACGTTG TGGGCTTTCC TCGGTCTGGA GTCTGCCTGT GCCAACGCCG AAGTAGTGGA AAACCCGGAA CGTAACGTGC CAATAGCAGT CCTTGGCGGT ACGTTAGGTG CGGCAGTGAT TTATATCGTC TCCACCAACG TGATTGCCGG GATTGTGCCC AATATGGAGC TGGCAAATTC AACGGCACCA TTTGGCCTGG CCTTCGCACA GATGTTCACA CCAGAAGTGG GTAAAGTCAT TATGGCGCTG ATGGTGATGT CCTGCTGCGG TTCACTGCTT GGCTGGCAGT TCACCATTGC CCAGGTGTTT AAATCTTCAT CTGATGAAGG CTACTTCCCT AAAATTTTCT CCCGTGTAAC CAAAGTGGAT GCACCGGTTC AGGGAATGTT GATCATTGTG ATTATTCAGA GTGGATTGGC ACTGATGACC ATTAGCCCGT CACTGAACAG CCAGTTCAAC GTGCTGGTTA ACCTGGCCGT GGTGACCAAT ATCATCCCGT ATATTCTGTC GATGGCAGCA TTAGTTATTA TTCAGCAGGT CGCCAATGTG CCACCGTCAA AAGCGAAAGT AGCAAACTTT GTTGCCTTTG TTGGTGCGAT GTACAGTTTC TATGCGCTGT ACTCATCCGG GGAAGAAGCC ATGCTGTACG GTTCCATCGT GACCTTCCTT GGTTGGACAC TGTATGGTCT GGTATCTCCA CGCTTTGAAC TGAAAAATAA ACACGGTTAA
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Protein sequence | MSQTKSNKMG VVQLTILTMV NMMGSGIIML PTKLAEVGTI SIISWLVTAV GSMALAWAFA KCGMFSRKAG GMGGYAEYAF GKSGNFMANY TYGVSLLIAN VAIAISAVGY GTELLGASLS PVQIGLATIG VLWICTVANF GGARITGQIS SITVWGVIIP VVGLCIIGWF WFSPTLYANS WNPHHVPFFS AVGSSIAMTL WAFLGLESAC ANAEVVENPE RNVPIAVLGG TLGAAVIYIV STNVIAGIVP NMELANSTAP FGLAFAQMFT PEVGKVIMAL MVMSCCGSLL GWQFTIAQVF KSSSDEGYFP KIFSRVTKVD APVQGMLIIV IIQSGLALMT ISPSLNSQFN VLVNLAVVTN IIPYILSMAA LVIIQQVANV PPSKAKVANF VAFVGAMYSF YALYSSGEEA MLYGSIVTFL GWTLYGLVSP RFELKNKHG
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