| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0695 |
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| Symbol | nagD |
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| ID | 6147371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 698954 |
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| End bp | 699706 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615585 |
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| Product | UMP phosphatase |
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| Protein accession | YP_001742784 |
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| Protein GI | 170682309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00424094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTA AAAATGTAAT TTGCGATATC GACGGCGTGC TGATGCACGA TAACGTCGCC
GTACCGGGTG CAGCGGAATT TTTGCACGGG ATTATGGATA AAGGCCTGCC GCTGGTGTTG
CTGACCAACT ATCCTTCGCA GACCGGGCAA GATCTGGCGA ACCGCTTTGC CACTGCGGGT
GTCGATGTGC CGGACAGCGT GTTTTATACC TCCGCGATGG CGACCGCCGA TTTCCTGCGT
CGCCAGGAAG GCAAGAAAGC GTATGTGGTG GGCGAAGGCG CACTGATTCA TGAACTGTAC
AAAGCCGGTT TCACTATTAC CGATGTGAAC CCTGATTTTG TGATTGTTGG CGAAACGCGT
TCCTACAACT GGGACATGAT GCATAAAGCA GCCTATTTCG TCGCTAACGG TGCACGCTTT
ATCGCCACCA ACCCGGACAC CCACGGGCGC GGTTTTTATC CGGCCTGTGG CGCGTTGTGT
GCAGGCATCG AAAAAATCTC CGGACGTAAA CCGTTCTATG TTGGTAAGCC GAGTCCGTGG
ATCATCCGCG CAGCATTAAA CAAAATGCAG GCGCATTCGG AAGAAACGGT GATTGTCGGC
GATAACTTGC GCACCGACAT TCTGGCGGGC TTCCAGGCGG GTCTGGAGAC GATTCTGGTG
CTTTCTGGTG TTTCATCGCT CGACGATATC GACAGTATGC CGTTCCGCCC AAGCTGGATT
TACCCGTCGG TCGCTGAAAT CGACGTTATC TGA
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| Protein sequence | MTIKNVICDI DGVLMHDNVA VPGAAEFLHG IMDKGLPLVL LTNYPSQTGQ DLANRFATAG
VDVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR
SYNWDMMHKA AYFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW
IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSSLDDI DSMPFRPSWI
YPSVAEIDVI
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