| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0685 |
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| Symbol | ubiF |
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| ID | 6144074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 694558 |
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| End bp | 695733 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641615575 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_001742781 |
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| Protein GI | 170680248 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00002921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATC AACCAACGGA AATTGCCATT GTCGGCGGAG GAATGGTCGG CGGCGCACTG
GCGCTGGGAC TGGCTCAGCA CGGATTTTCG GTAATGGTTA TCGAACATGC CCAACCTGCA
CCGTTTGTCG CTGACAGCCA GCCGGACGTG CGGATCTCGG CGATTAGTGC GGCTTCGGTA
TCATTGCTTA AAGGGTTAGG GGTCTGGGAT GCAGTACAGG CTATGCGTTG CCATCCTTAC
CGCAGACTGG AAACGTGGGA GTGGGAAACG GCGCATGTGG TGTTTGACGC CGCTGAACTT
AAGCTACCGT TGCTTGGCTA CATGGTGGAA AACACTGTCC TGCAACAGGC GCTGTGGCAG
GCGCTGGAAG CGCATCCGAA AGTAACGTTA CGTGTGCCAG GCTCGCTGAT TGCGCTGCAT
CGCCATAATG ATCTTCAGGA GCTGGAACTG AAGGGCGGTG AAACGATCCG CGCGAAGCTG
GTGATTGGTG CCGACGGCGC AAATTCGCAG GTGCGGCAGA TGGCGGGAAT TGGCGTTCAT
GCCTGGCAGT ATGCACAGTC GTGTATGTTG ATTAGCGTAC AGTGCGAGAA CGATCCCGGC
GATAGCACCT GGCAGCAATT TACCCCGGAC GGACCGCGTG CGTTTCTGCC GTTGTTTGAT
AACTGGGCAT CGCTGGTGTG GTATGACTCT CCGGCGCGCA TTCGCCAGTT GCAGAATATG
AATATGGCGC AGCTACAGGC GGAAATCGCG AAGCATTTCC CGTCGCGTCT GGGTTACGTG
ACACCGCTTG CCGCGGGGGC GTTTCCGCTG ACACGTCGCC ATGCGTTGCA GTATGTTCAG
CCGGGATTGG CACTGGTGGG AGATGCCGCG CATACCATCC ATCCGCTGGC GGGGCAGGGG
GTGAATCTTG GTTATCGTGA TGTCGATGCC CTGATTGACG TTCTGGTGAA CGCCCGCAGC
TACGGCGAAG CGTGGGCCAG TTATCCTGTG CTCAAGCGTT ACCAGATGCG GCGCATGGCG
GATAACTTCA TTATGCAAAG CGGTATGGAT CTGTTTTATG CCGGATTCAG CAATAATCTG
CCACCACTGC GTTTTATGCG TAATCTCGGA TTAATGGCGG CGGAGCGTGC TGGCGTGTTG
AAACGTCAGG CGCTGAAATA TGCGTTAGGG TTGTAG
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| Protein sequence | MTNQPTEIAI VGGGMVGGAL ALGLAQHGFS VMVIEHAQPA PFVADSQPDV RISAISAASV
SLLKGLGVWD AVQAMRCHPY RRLETWEWET AHVVFDAAEL KLPLLGYMVE NTVLQQALWQ
ALEAHPKVTL RVPGSLIALH RHNDLQELEL KGGETIRAKL VIGADGANSQ VRQMAGIGVH
AWQYAQSCML ISVQCENDPG DSTWQQFTPD GPRAFLPLFD NWASLVWYDS PARIRQLQNM
NMAQLQAEIA KHFPSRLGYV TPLAAGAFPL TRRHALQYVQ PGLALVGDAA HTIHPLAGQG
VNLGYRDVDA LIDVLVNARS YGEAWASYPV LKRYQMRRMA DNFIMQSGMD LFYAGFSNNL
PPLRFMRNLG LMAAERAGVL KRQALKYALG L
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