Gene EcSMS35_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0655 
SymbolmrdA 
ID6144824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp666920 
End bp668821 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content53% 
IMG OID641615545 
Productpenicillin-binding protein 2 
Protein accessionYP_001742751 
Protein GI170679724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000471681 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC AGAACTCTTT TCGCGACTAT ACGGCAGAGT CCGCGCTGTT TGTGCGCCGG 
GCGCTGGTCG CCTTTTTGGG GATTTTGCTG CTGACCGGCG TGCTTATCGC CAACCTGTAT
AATCTGCAAA TTGTTCGCTT TACCGACTAC CAGACCCGCT CTAATGAAAA CCGCATTAAG
CTGGTGCCTA TCGCACCCAG CCGCGGCATT ATCTACGACC GTAACGGTAT CCCTCTGGCT
CTCAACCGCA CTATCTACCA GATAGAAATG ATGCCGGAGA AAGTCGATAA CGTGCAGCAA
ACGCTGGACG CTTTGCGCAG CGTGGTTGAT CTGACCGATG ATGATATTGC TGCATTCCGA
AAAGAGCGCG CACGTTCACA CCGTTTCACC TCCATTCCGG TGAAAACTAA CCTGACCGAA
GTACAAGTAG CTCGCTTTGC CGTCAACCAG TACCGTTTTC CGGGTGTTGA AGTTAAAGGC
TATAAACGTC GTTACTATCC TTACGGTTCG GCGTTGACCC ACGTCATCGG CTATGTGTCG
AAAATCAACG ATAAAGACGT CGAACGCCTG AATAATGACG GCAAACTGGC CAACTATGCG
GCAACGCATG ATATCGGTAA GCTGGGCATT GAGCGTTACT ATGAAGACGT GCTGCACGGT
CAGACTGGTT ATGAAGAGGT TGAAGTTAAC AACCGTGGGC GTGTTATCCG CCAGTTAAAA
GAAGTACCAC CGCAAGCCGG ACACGATATT TACCTGACGC TGGATCTCAA ACTCCAGCAA
TATATTGAAA CGCTGCTGGC GGGTAGCCGC GCAGCTGTGG TAGTCACCGA TCCGCGTACA
GGTGGGGTGC TGGCGCTGGT TTCCACGCCT AGTTATGACC CAAACCTGTT TGTTGACGGT
ATCTCCAGCA AAGATTATTC CGCCTTGCTG AACGACCCGA ATACACCGCT GGTGAACCGC
GCCACACAAG GGGTTTATCC TCCCGCGTCT ACAGTTAAAC CCTATGTGGC GGTTTCGGCA
TTGAGCGCCG GAGTGATCAC GCGCAATACG ACGCTGTTTG ACCCAGGCTG GTGGCAACTG
CCAGGTTCGG AAAAACGTTA TCGTGACTGG AAAAAATGGG GCCACGGGCG TCTGAATGTC
ACAAGATCGC TGGAAGAATC TGCGGATACC TTCTTCTATC AGGTGGCCTA CGATATGGGA
ATCGATCGCC TCTCCGAATG GATGGGTAAA TTCGGTTATG GTCATTACAC CGGTATCGAC
CTGGCGGAAG AACGTTCCGG CAACATGCCT ACCCGCGAAT GGAAACAGAA ACGCTTTAAA
AAACCGTGGT ATCAGGGTGA CACCATTCCG GTTGGTATCG GTCAGGGTTA CTGGACAGCG
ACCCCAATCC AGATGAGTAA GGCACTGATG ATCCTGATTA ATGACGGTAT CGTGAAGGTT
CCGCATTTGC TGATGAGCAC CGCCGAAGAC GGCAAACAGG TGCCATGGGT ACAACCGCAT
GAACCGCCCG TCGGCGATAT TCATTCCGGT TACTGGGAGC TGGCAAAAGA CGGTATGTAC
GGTGTTGCTA ACCGCCCTAA CGGTACGGCG CATAAATACT TTGCCAGCGC ACCGTACAAA
ATTGCAGCAA AATCCGGTAC GGCTCAGGTC TTCGGCCTGA AAGCGAACGA AACCTATAAT
GCGCACAAAA TTGCCGAGCG TTTACGTGAC CACAAACTGA TGACCGCCTT TGCGCCATAC
AACAATCCGC AAGTGGCTGT CGCCATGATT CTGGAGAACG GTGGCGCGGG TCCGGCGGTT
GGTACGCTGA TGCGCCAGAT CCTCGACCAC ATTATGCTGG GTGATAACAA CACCGATCTG
CCTGCGGAAA ATCCAGCGGT TGCCGCAGCG GAGGACCATT AA
 
Protein sequence
MKLQNSFRDY TAESALFVRR ALVAFLGILL LTGVLIANLY NLQIVRFTDY QTRSNENRIK 
LVPIAPSRGI IYDRNGIPLA LNRTIYQIEM MPEKVDNVQQ TLDALRSVVD LTDDDIAAFR
KERARSHRFT SIPVKTNLTE VQVARFAVNQ YRFPGVEVKG YKRRYYPYGS ALTHVIGYVS
KINDKDVERL NNDGKLANYA ATHDIGKLGI ERYYEDVLHG QTGYEEVEVN NRGRVIRQLK
EVPPQAGHDI YLTLDLKLQQ YIETLLAGSR AAVVVTDPRT GGVLALVSTP SYDPNLFVDG
ISSKDYSALL NDPNTPLVNR ATQGVYPPAS TVKPYVAVSA LSAGVITRNT TLFDPGWWQL
PGSEKRYRDW KKWGHGRLNV TRSLEESADT FFYQVAYDMG IDRLSEWMGK FGYGHYTGID
LAEERSGNMP TREWKQKRFK KPWYQGDTIP VGIGQGYWTA TPIQMSKALM ILINDGIVKV
PHLLMSTAED GKQVPWVQPH EPPVGDIHSG YWELAKDGMY GVANRPNGTA HKYFASAPYK
IAAKSGTAQV FGLKANETYN AHKIAERLRD HKLMTAFAPY NNPQVAVAMI LENGGAGPAV
GTLMRQILDH IMLGDNNTDL PAENPAVAAA EDH