Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0638 |
Symbol | dpiB |
ID | 6145500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 651634 |
End bp | 653292 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641615530 |
Product | sensor histidine kinase DpiB |
Protein accession | YP_001742736 |
Protein GI | 170681994 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.736103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAGC TTAACGAGAA TAAACAGTTT GCATTTTTCC AAAGACTGGC ATTTCCGCTG CGTATCTTTT TGCTGATTCT GGTGTTCTCA ATATTTGTCA TTGCAGCCCT GGCGCAATAT TTTACAGCCA GTTTTGAGGA CTATTTAACG CTTCATGTGC GCGACATGGC AATGAATCAG GCAAAAATTA TTGCTTCTAA TGACAGTATC ATCAGCGCAG TGAAAACGCG TGACTACAAG AGGCTGGCGA CCATCGCTGA CAAATTACAA AGAGATACTG ATTTCGATTA TGTGGTGATT GGCGATCGGC ACTCGATTCG TCTTTACCAT CCTAATCCGG AGAAAATTGG TTATCCTATG CAGTTCACCA AACCGGGCGC GCTGGAGAAA GGGGAGAGCT ACTTCATCAC CGGGAAAGGG TCAATTGGCA TGGCGATGCG TGCCAAAACG CCAATCTTTG ATGACGATGG AAAAGTCATC GGCGTGGTGT CGATTGGCTA CCTGGTGAGT AAAATCGATA GCTGGCGGGC TGAGTTTTTA TTACCGATGG CTGGCGTGTT TGTCGTGCTG TTAGGGATTC TGATGTTGCT ATCGTGGTTC CTGGCCGCGC ATATCCGTCG GCAGATGATG GGCATGGAGC CAAAGCAAAT CGCACGCGTG GTCCGTCAGC AAGAGGCGCT GTTTAGTTCG GTTTATGAAG GGCTCATTGC GGTGGATCCG CATGGTTACA TTACCGCCAT CAATCGTAAC GCAAGAAAGA TGCTGGGTCT GAGTTCCCCC GGACGGCAAT GGTTGGGTAA ACCCATTGCT GAAGTGGTCA GGCCCGCCGA TTTCTTTACC GAACAGATTG ATGAAAAACG TCAGGATGTG GTGGCGAACT TTAACGGTCT GAGCGTTATT GCCAACCGGG AAGCTATTCG TTCTGGTGAT GATTTGCTGG GGGCCATTAT CAGCTTTCGT AGTAAAGACG AAATATCCAC CCTCAATGCG CAACTGACGC AAATTAAACA ATACGTCGAG AGCCTGCGCA CATTGCGACA CGAGCATCTC AATTGGATGT CGACGCTCAA TGGTCTGTTG CAGATGAAAG AGTATGATCG CGTGCTGGCG ATGGTGCAGG GGGAGTCTCA GGCCCAGCAA CAGCTTATTG ATAGCCTGCG CGAGGCGTTT GCCGATCGCC AGGTGGCGGG GCTGCTTTTT GGTAAAGTGC AGCGCGCCCG CGAACTGGGG CTAAAAATGG TCATCGTCCC CGGAAGTCAG CTTTCGCAAC TGCCGCCAGG ACTGGACAGC ACCGAGTTTG CAGCCATTGT TGGCAATTTA CTTGATAACG CCTTCGAAGC CAGCCTACGT AGCGATGAAG GAAACAAGAT CGTTGAATTA TTCCTCAGCG ATGAAGGCGA TGATGTGGTG ATTGAAGTCG CCGATCAGGG CTGCGGCGTT CCAGAGTCTC TACGAGACAA AATATTTGAG CAGGGTGTCA GTACGCGTGC TGACGAGCCC GGCGAACATG GCATTGGGTT GTACTTGATT GCCAGCTACG TAACGCGCTG CGGTGGTGTT ATCACTCTCG AAGATAATGA TCCCTGCGGT ACCTTATTTT CAATCTATAT TCCGAAAGTG AAACCTAATG ACAGCTCCAT TAACCCTATT GATCGTTGA
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Protein sequence | MLQLNENKQF AFFQRLAFPL RIFLLILVFS IFVIAALAQY FTASFEDYLT LHVRDMAMNQ AKIIASNDSI ISAVKTRDYK RLATIADKLQ RDTDFDYVVI GDRHSIRLYH PNPEKIGYPM QFTKPGALEK GESYFITGKG SIGMAMRAKT PIFDDDGKVI GVVSIGYLVS KIDSWRAEFL LPMAGVFVVL LGILMLLSWF LAAHIRRQMM GMEPKQIARV VRQQEALFSS VYEGLIAVDP HGYITAINRN ARKMLGLSSP GRQWLGKPIA EVVRPADFFT EQIDEKRQDV VANFNGLSVI ANREAIRSGD DLLGAIISFR SKDEISTLNA QLTQIKQYVE SLRTLRHEHL NWMSTLNGLL QMKEYDRVLA MVQGESQAQQ QLIDSLREAF ADRQVAGLLF GKVQRARELG LKMVIVPGSQ LSQLPPGLDS TEFAAIVGNL LDNAFEASLR SDEGNKIVEL FLSDEGDDVV IEVADQGCGV PESLRDKIFE QGVSTRADEP GEHGIGLYLI ASYVTRCGGV ITLEDNDPCG TLFSIYIPKV KPNDSSINPI DR
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