Gene EcSMS35_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0596 
SymbolnfnB 
ID6145902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp607242 
End bp607895 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID641615488 
Productdihydropteridine reductase 
Protein accessionYP_001742694 
Protein GI170680898 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA TTTCTGTCGC CTTAAAGCGT CATTCCACTA AGGCATTTGA TGCCAGCAAA 
AAACTTACCC CGGAACAGGC CGAGCAGATA AAAACTCTAC TGCAATACAG CCCATCCAGC
ACCAACTCCC AGCCGTGGCA TTTTATTGTT GCCAGCACGG AAGAAGGTAA AGCGCGTGTT
GCCAAATCCG CTGCCGGTAA TTACGTGTTC AACGAGCGTA AAATGCTTGA TGCCTCGCAC
GTCGTGGTGT TCTGTGCAAA AACCGCGATG GACGATGCCT GGCTGAAGCT GGTTGTTGAC
CAGGAAGATG CCGATGGCCG CTTTGCCACG CCGGAAGCGA AAGCCGCGAA CGATAAAGGT
CGCAAGTTCT TCGCCGATAT GCACCGTAAA GATCTGCATG ATGATGCAGA GTGGATGGCA
AAACAGGTTT ATCTCAACGT CGGCAACTTC CTGCTCGGCG TGGCGGCGCT GGGTCTGGAC
GCGGTACCCA TCGAAGGTTT TGACGCCGCC ATCCTCGATG CAGAATTTGG TCTGAAAGAG
AAAGGCTACA CCAGTCTGGT AGTTGTTCCG GTGGGTCATC ACAGCGTTGA AGATTTTAAC
GCTACGCTGC CGAAATCTCG TCTGCCGCAA AACATCACCT TAACCGAAGT GTAA
 
Protein sequence
MDIISVALKR HSTKAFDASK KLTPEQAEQI KTLLQYSPSS TNSQPWHFIV ASTEEGKARV 
AKSAAGNYVF NERKMLDASH VVVFCAKTAM DDAWLKLVVD QEDADGRFAT PEAKAANDKG
RKFFADMHRK DLHDDAEWMA KQVYLNVGNF LLGVAALGLD AVPIEGFDAA ILDAEFGLKE
KGYTSLVVVP VGHHSVEDFN ATLPKSRLPQ NITLTEV