Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0538 |
Symbol | |
ID | 6145068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 545098 |
End bp | 546015 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615432 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_001742639 |
Protein GI | 170681599 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATCT TTATCCCTAT TCTCATTTTT GTCGCGCTGG TCATTGTCGG CGCGGGCGTC AAAATCGTGC CGCAGGGCTA TCAATGGACG GTAGAGCGTT TTGGTCGCTA TACCAAAACG TTACAGCCAG GTCTAAGCCT AGTGGTGCCC TTTATGGATC GCATTGGTCG CAAGATCAAT ATGATGGAGC AAGTGCTCGA CATCCCTTCC CAGGAAGTTA TCTCGAAAGA TAACGCCAAC GTTACCATCG ACGCCGTGTG CTTTATTCAG GTGATTGATG CCCCGCGCGC CGCTTATGAA GTCAGCAATC TGGAGCTGGC GATCATCAAC CTGACCATGA CTAACATCCG TACCGTGCTG GGTTCAATGG AACTTGATGA AATGCTCTCT CAGCGCGACA GCATCAACTC ACGCCTGCTG CGTATTGTCG ATGAGGCCAC CAACCCGTGG GGGATTAAAG TCACCCGTAT TGAAATTCGC GACGTGCGCC CACCGGCAGA GCTTATCTCT TCAATGAACG CGCAGATGAA AGCGGAACGT ACCAAACGCG CTTACATCCT TGAAGCGGAA GGGATCCGTC AGGCGGAAAT CCTCAAAGCC GAAGGTGAAA AACAGTCGCA AATCCTGAAA GCGGAAGGTG AACGTCAGTC GGCATTCTTA CAGGCCGAAG CGCGTGAACG TTCTGCCGAA GCGGAAGCCC GCGCCACCAA AATGGTGTCT GAAGCCATTG CCTCCGGCGA TATTCAGGCG GTGAACTACT TCGTCGCACA GAAATACACC GAAGCGTTAC AGCAGATCGG TTCCTCCAGT AACAGCAAAG TAGTGATGAT GCCATTAGAG GCCAGCAGCC TGATGGGGTC GATTGCCGGG ATTGCCGAGC TGGTGAAAGA CAGCGCCAAC AAACGGACTC AGCCATGA
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Protein sequence | MLIFIPILIF VALVIVGAGV KIVPQGYQWT VERFGRYTKT LQPGLSLVVP FMDRIGRKIN MMEQVLDIPS QEVISKDNAN VTIDAVCFIQ VIDAPRAAYE VSNLELAIIN LTMTNIRTVL GSMELDEMLS QRDSINSRLL RIVDEATNPW GIKVTRIEIR DVRPPAELIS SMNAQMKAER TKRAYILEAE GIRQAEILKA EGEKQSQILK AEGERQSAFL QAEARERSAE AEARATKMVS EAIASGDIQA VNYFVAQKYT EALQQIGSSS NSKVVMMPLE ASSLMGSIAG IAELVKDSAN KRTQP
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