| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0445 |
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| Symbol | tsx1 |
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| ID | 6147520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 455538 |
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| End bp | 456422 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641615341 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_001742548 |
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| Protein GI | 170680575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CATTACTGGC AGCCGGTGCG GTACTGGCGC TCTCTTCGTC TTTTACTGTC
AACGCAGCTG AAAACGACAA ACCGCAGTAT CTTTCCGACT GGTGGCACCA GAGCGTTAAC
GTTGTCGGAA GCTATCACAC CCGTTTCGGA CCGCAGATCC GCAACGATAC CTACCTTGAG
TACGAAGCAT TCGCTAAAAA AGACTGGTTC GACTTCTATG GTTATGCGGA TGCGCCGGTA
TTCTTCGGCG GTAACTCCGA TGCAAAAGGT ATCTGGAACC ACGGTTCTCC GCTGTTTATG
GAAATCGAAC CGCGTTTCTC CATCGACAAA CTGACCAATA CTGACCTTAG CTTCGGTCCG
TTCAAAGAGT GGTACTTCGC GAACAACTAC ATTTACGACA TGGGTCGTAA TAAAGATGGT
CGCCAGAGCA CCTGGTACAT GGGTCTGGGT ACCGACATCG ATACTGGTCT GCCGATGAGC
CTGTCCATGA ACGTCTATGC GAAATACCAG TGGCAGAACT ATGGCGCAGC GAACGAAAAC
GAGTGGGACG GTTACCGTTT CAAAATTAAA TACTTTGTGC CGATTACCGA TCTGTGGGGC
GGTCAGCTGA GCTACATCGG CTTCACCAAC TTCGACTGGG GTTCCGATTT AGGGGATGAC
AGCGGTAACG CAATCAACGG TATTAAGACC CGTACTAATA ACTCTATCGC TTCCAGCCAT
ATTCTGGCTC TGAACTACGA TCATTGGCAC TACTCTGTCG TAGCTCGTTA CTGGCACGAC
GGTGGTCAGT GGAACGACGA TGCAGAACTG AACTTCGGCA ACGGCAACTT CAACGTTCGC
TCTACCGGCT GGGGTGGTTA CCTGGTAGTA GGTTACAACT TCTAA
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| Protein sequence | MKKTLLAAGA VLALSSSFTV NAAENDKPQY LSDWWHQSVN VVGSYHTRFG PQIRNDTYLE
YEAFAKKDWF DFYGYADAPV FFGGNSDAKG IWNHGSPLFM EIEPRFSIDK LTNTDLSFGP
FKEWYFANNY IYDMGRNKDG RQSTWYMGLG TDIDTGLPMS LSMNVYAKYQ WQNYGAANEN
EWDGYRFKIK YFVPITDLWG GQLSYIGFTN FDWGSDLGDD SGNAINGIKT RTNNSIASSH
ILALNYDHWH YSVVARYWHD GGQWNDDAEL NFGNGNFNVR STGWGGYLVV GYNF
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