Gene EcSMS35_0366 details

Gene Information

• Locus tag: EcSMS35_0366
• Symbol: prpE
• ID: 6145571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 377235
• End bp: 379121
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641615262
• Product: propionyl-CoA synthetase
• Protein accession: YP_001742469
• Protein GI: 170679862
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 45
• Fosmid unclonability p-value: 0.708561
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTTTTA GCGAATTTTA TCAGCGTTCG ATTAACGAAC CGGAGAAGTT CTGGGCCGAG 
CAGGCCCGGC GTATTGACTG GCAGACGCCC TTTACGCAAA CGCTTGATCA CAGCAATCCG 
CCGTTTGCCC GTTGGTTTTG TGAAGGCCGA ACCAACTTGT GTCACAACGC TATCGACCGC 
TGGCTGGAGA AACAGCCAGA GGCGCTGGCG CTGATTGCCG TCTCTTCGGA AACAGAAGAA 
GAGCGCACCT TTACCTTTCG TCAGCTGCAT GACGAAGTGA ACGCAGTGGC GTCAATGCTG 
CGCTCACTGG GCGTACGGCG TGGCGATCGG GTGCTGGTGT ATATGCCGAT GATTGCCGAA 
GCGCATATTA CTCTGCTGGC CTGCGCGCGC ATTGGCGCTA TTCACTCGGT GGTGTTTGGT 
GGATTTGCCT CGCACAGCGT GGCGGCGCGA ATTGATGATG CTAAACCGGT GCTGATTGTC 
TCGGCTGATG CCGGAGCGCG CGGTGGCAAA ATTATTCCGT ATAAAAAATT GCTCGACGAT 
GCGATAAGCC AGGCGCATCA TCAGCCGCGC CACGTTTTAC TGGTGGATCG CGGGCTGGCG 
AAAATGGCGC GCGTTACCGG ACGGGATGTC GATTTCGCGT CATTGCGCCA TCAACACATC 
GGCGCGCGGG TACCGGTGGC GTGGCTGGAA TCCAACGAAA CCTCCTGCAT TCTCTACACC 
TCCGGCACGA CCGGCAAACC TAAAGGCGTG CAACGTGACG TTGGCGGATA TGCGGTGGCG 
CTGGCGACCT CGATGGACAC CATTTTTGGC GGCAAAGCGG GCGGTGTGTT CTTCTGTGCG 
TCGGATATCG GCTGGGTGGT GGGGCATTCG TATATCGTCT ACGCGCCGCT GCTGGCGGGG 
ATGGCGACTA TCGTTTACGA AGGATTACCG ACCTGGCCGG ACTGCGGCGT GTGGTGGAAA 
ATCGTCGAGA AATATCAGGT TAGTCGGATG TTCTCAGCGC CGACCGCCAT TCGCGTGCTG 
AAAAAATTCC CTACCGCTGA AATTCGCAAA CACGATCTCT CGTCGCTGGA AGTGCTCTAT 
CTGGCTGGAG AACCGCTGGA CGAGCCGACC GCCAGTTGGG TGAGCAATAC GCTGGATGTG 
CCGGTCATCG ACAACTACTG GCAGACCGAA TCCGGCTGGC CGATTATGGC GATTGCTCGC 
GGTCTGGACG ACAGGCCGAC GCGTCTGGGA AGCCCCGGCG TGCCGATGTA TGGCTATAAC 
GTGCAGTTGC TTAATGAAGT CACCGGCGAA CCGTGTGGCG TCAATGAGAA AGGGATGCTG 
GTGGTGGAGG GGCCATTGCC GCCAGGCTGT ATTCAGACCA TCTGGGGCGA CGACGACCGC 
TTTGTGAAGA CGTACTGGTC GCTGTTTTCC CGTCCGGTGT ACGCCACTTT TGACTGGGGC 
ATCCGCGATG CTGACGGCTA TCACTTTATC CTGGGGCGTA CTGATGATGT GATTAACGTT 
GCCGGGCATC GGCTGGGGAC GCGCGAGATT GAAGAGAGTA TCTCCAGTCA TCCGGGCGTT 
GCCGAAGTGG CGGTGGTTGG GGTGAAAGAT GCGCTGAAAG GGCAGGTGGC GGTGGCGTTT 
GTCATTCCGA AAGAGAGCGA CAGTCTGGAA GATCGTGAGG TGGCGCATTC GCAAGAGAAG 
GCGATTATGG CGCTGGTGGA CAGCCAGATT GGCAACTTTG GCCGCCCGGC GCACGTCTGG 
TTTGTCTCGC AATTGCCGAA AACGCGATCC GGAAAAATGC TGCGCCGCAC GATCCAGGCG 
ATTTGCGAAG GACGCGATCC TGGGGATCTG ACGACCATTG ATGATCCTGC GTCGTTGGAT 
CAGATCCGCC AGGCGATGGA AGAGTAG 

 

Protein sequence

MSFSEFYQRS INEPEKFWAE QARRIDWQTP FTQTLDHSNP PFARWFCEGR TNLCHNAIDR 
WLEKQPEALA LIAVSSETEE ERTFTFRQLH DEVNAVASML RSLGVRRGDR VLVYMPMIAE 
AHITLLACAR IGAIHSVVFG GFASHSVAAR IDDAKPVLIV SADAGARGGK IIPYKKLLDD 
AISQAHHQPR HVLLVDRGLA KMARVTGRDV DFASLRHQHI GARVPVAWLE SNETSCILYT 
SGTTGKPKGV QRDVGGYAVA LATSMDTIFG GKAGGVFFCA SDIGWVVGHS YIVYAPLLAG 
MATIVYEGLP TWPDCGVWWK IVEKYQVSRM FSAPTAIRVL KKFPTAEIRK HDLSSLEVLY 
LAGEPLDEPT ASWVSNTLDV PVIDNYWQTE SGWPIMAIAR GLDDRPTRLG SPGVPMYGYN 
VQLLNEVTGE PCGVNEKGML VVEGPLPPGC IQTIWGDDDR FVKTYWSLFS RPVYATFDWG 
IRDADGYHFI LGRTDDVINV AGHRLGTREI EESISSHPGV AEVAVVGVKD ALKGQVAVAF 
VIPKESDSLE DREVAHSQEK AIMALVDSQI GNFGRPAHVW FVSQLPKTRS GKMLRRTIQA 
ICEGRDPGDL TTIDDPASLD QIRQAMEE