| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0349 |
|---|
| Symbol | |
|---|
| ID | 6146799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 360527 |
|---|
| End bp | 361132 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641615245 |
|---|
| Product | ankyrin repeat-containing protein |
|---|
| Protein accession | YP_001742453 |
|---|
| Protein GI | 170682347 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATAA AAAATCTACC TGCCGACTAT TTATTGGCTG CGCAACAGGG TGATATCGAT
AAAGTAAAAA CCTGCCTTGC GCTGGGTGTC GATATTAATA CCTGCGATCG TCAGGGGAAA
ACGGCAATTA CGCTGGCAAG TTTATATCAG CAATATGCTT GCGTTCAGGC ATTAATTGAC
GCCGGAGCGG ATATTAATAA GCAAGATCAG ATATGTTCAA ATCCTTTTTT AATTAGCTGC
CTGACCGGCG ATTTAACCCT GTTACGGATT ATTTTACCGG CTAAACCCGA TCTTAATTGC
GTAACCCGTT TTGGCGGTGT CGGCCTGACG CCTGCCTGTG AAAAAGGCCA TTTAAGTATT
GTAAAAGAGC TTTTGGCGCA TACGGAGATT AACGTTAACC AGACCAACCA TGTTGGCTGG
ACGCCGCTAC TGGAAGCAAT TGTGCTTAAT GATGGCGGGA TTAAACAGCA GGCGATTGTC
CAGTTATTGC TGGAACACGG TGCCAGCCCG CACATGACGG ATAAATATGG CAAAACGCCG
CTGGAACTGG CGCGGGAACG AGGCTTTGAA GAGATTGCGC AGTTACTGAT TGCCGCAGGC
GCATAA
|
|---|
| Protein sequence | MTIKNLPADY LLAAQQGDID KVKTCLALGV DINTCDRQGK TAITLASLYQ QYACVQALID
AGADINKQDQ ICSNPFLISC LTGDLTLLRI ILPAKPDLNC VTRFGGVGLT PACEKGHLSI
VKELLAHTEI NVNQTNHVGW TPLLEAIVLN DGGIKQQAIV QLLLEHGASP HMTDKYGKTP
LELARERGFE EIAQLLIAAG A
|
|---|
| |