Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0266 |
Symbol | lfgE |
ID | 6144018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 277141 |
End bp | 278343 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641615164 |
Product | lateral flagellar hook protein LfgE |
Protein accession | YP_001742373 |
Protein GI | 170681389 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATG AAATTGCCGC AACGGGGCTG AATGCCGTTA ACGAACAGCT GGACGGGATC AGTAACAACA TCGCCAACGC CGGAACGGTA GGCTATAAGT CGATGACCAC CCAGTTTTCA GCCATGTATG CCGGAAGTCA GGCGATGGGC GTCAGCGTGG CAGGCACCGC GCAAAGTATT TCGCGCGGCG GTTCGCTGGT ATCCACCGGT AACGCGCTGG ATCTGGCGAT TAACGACGAC GGTTTTTTTG TTACCTGCGA CAGCGCGGGC AACATTTCTT ATACCCGCGC CGGATCGTTT GAAACCGACA AAAACGGCTA TATCGTCAAC GCCTCAGGCG CTTATTTGCA GGGCTATCCG GTCGATGACA CGGGCACTCT GCAAACCGGT ACAGTCACCG ATATCCAGAT CAAAACTGGC AATATTCCGG CGCAGGCCAG CAGCAGCCTG ACCTTTACCG CCAACTTCGA TGCCAGCGAC GACGCTATCG ACCGCACTAC CGTACCGTTC GACGCGACCA ACAGCAGCTC GTATACCGAC AGCTACACCA CCACGGTGTA CGACTCATTA GGTAACGAAC ACTCGGTATG CCAGTACTTC ACCAAAACCA GCGACAACAC CTGGGAAGTG CAGTACACCT TCGACGGTCA GCAGCAGACC GGCGTTCCGG CGACGACGTT AACCTTCGAC CCGAACACCG GGAAGCTGAC TTCGCCAACC ACGCCGCAGA CCATTGAGTT TCAGACCGAC GCCGCCGCAC CCATCGACTT AACCGTCGAT TACTCCACCT GTACGCAATA CGGCTCTGAA TTTTCGGTCA CCACCAACGC CGCCAACGGC TACGCCTCCG CTACGCAAAA CGGTGTGCAG GTCGATGACG ATGGCAAAGT TTACGCTACC TACAGCAACG GCGAGCGCAT GTTGCAGGGC CAGGTGGTGC TGGCGACTTT CCCGAATGAA AACGGACTCG AAGCGGTGAG CGGCACCGCG TGGGTACAAA CTGGGGAATC CGGCACGCCG CTGATTGGCG TTCCCGGCTC CGGTTCCTGC GGCACGCTGT CGTCGGGCGT GCTCGAAAGC TCTAACGTCG ATATCACCAG CGAGTTAGTC AACCTGATGA CCGCCCAGCG TAACTATCAG GCCAACACCA AAGTGATCGC CACCAGCACG CAGCTCGATG ACGCGCTGTT CCAGGCAATG TAA
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Protein sequence | MSYEIAATGL NAVNEQLDGI SNNIANAGTV GYKSMTTQFS AMYAGSQAMG VSVAGTAQSI SRGGSLVSTG NALDLAINDD GFFVTCDSAG NISYTRAGSF ETDKNGYIVN ASGAYLQGYP VDDTGTLQTG TVTDIQIKTG NIPAQASSSL TFTANFDASD DAIDRTTVPF DATNSSSYTD SYTTTVYDSL GNEHSVCQYF TKTSDNTWEV QYTFDGQQQT GVPATTLTFD PNTGKLTSPT TPQTIEFQTD AAAPIDLTVD YSTCTQYGSE FSVTTNAANG YASATQNGVQ VDDDGKVYAT YSNGERMLQG QVVLATFPNE NGLEAVSGTA WVQTGESGTP LIGVPGSGSC GTLSSGVLES SNVDITSELV NLMTAQRNYQ ANTKVIATST QLDDALFQAM
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