| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0262 |
|---|
| Symbol | lfgA |
|---|
| ID | 6147077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 274817 |
|---|
| End bp | 275554 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641615160 |
|---|
| Product | lateral flagellar P-ring addition protein LfgA |
|---|
| Protein accession | YP_001742369 |
|---|
| Protein GI | 170682474 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTC AATTTTGCAG GCGGAAGTTT TATTTCCTCC TGGCGCTGGC CTTACCGGGC
TACGCCGCCG TCCATCCCGT GCAACATAGC GCGCGGGAAC AAATCAACGC CCAGGTACTG
AATACCGCGA GCCAAAAAAT TGAATCGCTG GCGCAGCAGC GGCAATGGCA TGACTATCGC
TACACCTTTA AGGTCTATAT TCCGTCGCAG ATTGCGACCG CCGCGCCCTG TACAACGTCA
CCCGGCGTCA CGCTGACGTC GCCTGCGGAA ATCGCCCTTA ACCGGATGAA CTTCACCGTC
AGTTGCCCGC AAAGCTGGCA GATGAACGTC GCGGTGCGCC CGGATGTTCT GGTACCGGTG
GTGATGGCAA AGTCACTGGT TGCCCGCGAT ACGCCGCTCA CGGCAAATGA TGTGGAGCTG
AAGCCCTACA ACGTCAGCGC CCAGCGTCGC GATGTGTTGA TGGAGCTCGA TGACGCAATT
GGTTTAAGCA GTAAGCACGC GTTGCAACCG GGCAGACCAA TCACCAAAGA AGAGCTGGTT
TCGCCAGTGC TGGTCGAACG CGATCAGCCG GTGATGATTG TTTACCAGAG CGCGGGGATC
ACCGCCTCGA TGCCCGGCGT GGCGCTGAAA AATGGTCGCA AAGGGGAAAT GGTGAAAGTA
CGTAACGTCA GCAGCCAGCG GGTCATTAGC GCGAGGGTGG CGGAAAGCGG CGTGGTGACA
ACGGTAAGCG CGGAGTAA
|
|---|
| Protein sequence | MSFQFCRRKF YFLLALALPG YAAVHPVQHS AREQINAQVL NTASQKIESL AQQRQWHDYR
YTFKVYIPSQ IATAAPCTTS PGVTLTSPAE IALNRMNFTV SCPQSWQMNV AVRPDVLVPV
VMAKSLVARD TPLTANDVEL KPYNVSAQRR DVLMELDDAI GLSSKHALQP GRPITKEELV
SPVLVERDQP VMIVYQSAGI TASMPGVALK NGRKGEMVKV RNVSSQRVIS ARVAESGVVT
TVSAE
|
|---|
| |