Gene EcSMS35_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0235 
Symbol 
ID6143284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp252006 
End bp252746 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content49% 
IMG OID641615135 
Producthypothetical protein 
Protein accessionYP_001742344 
Protein GI170680694 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.480121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA TCGCATTAAT TCTTGCGATG TTGTTGATCC CGTGCGTTTC GTTTGCCGGT 
TTGCTGGGCA GCAGTAGCTC GACCACGCCA GTGAGCAAAG AGTATAAGCA GCAGTTGATG
GGATCCCCTG TCTACATCCA GATCTTCAAG GAAGAACGTA CGCTCGATCT CTACGTCAAA
ATGGGCGAGC AATATCAACT GCTCGACAGC TATAAAATCT GTAAATATTC CGGCGGCTTA
GGGCCAAAAC AGCGTCAGGG CGATTTCAAA AGCCCGGAAG GGTTTTATAG CGTCCAGCGT
AATCAGTTAA AACCAGACAG CCGTTACTAC AAAGCGATTA ATATTGGATT CCCAAACGCC
TATGACCGTG CGCATGGTTA TGAAGGGAAA TACCTGATGA TTCACGGCGA TTGTGTTTCC
ATCGGCTGCT ACGCGATGAC CAATCAGGGT ATTGATGAGA TCTTCCAGTT CGTTACTGGT
GCGCTGGTGT TTGGTCAGCC GAGCGTGCAA GTGAGTATTT ACCCGTTCCG TATGACCGAC
GCCAATATGA AGCGCCATAA ATATTCCAAC TTTAAGGACT TCTGGGAGCA ACTGAAGCCA
GGCTACGACT ACTTTGAGCA AACCCGTAAG CCACCGACCG TTTCTGTGGT CAATGGCCGT
TACGTGGTCA GCAAGCCGTT AAGCCACGAA GTTGTGCAGC CACAACTGGC ATCAAACTAC
ACGCTCCCCG AGGCAAAATA A
 
Protein sequence
MRKIALILAM LLIPCVSFAG LLGSSSSTTP VSKEYKQQLM GSPVYIQIFK EERTLDLYVK 
MGEQYQLLDS YKICKYSGGL GPKQRQGDFK SPEGFYSVQR NQLKPDSRYY KAINIGFPNA
YDRAHGYEGK YLMIHGDCVS IGCYAMTNQG IDEIFQFVTG ALVFGQPSVQ VSIYPFRMTD
ANMKRHKYSN FKDFWEQLKP GYDYFEQTRK PPTVSVVNGR YVVSKPLSHE VVQPQLASNY
TLPEAK