Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0192 |
Symbol | lpxA |
ID | 6144570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 211742 |
End bp | 212530 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615093 |
Product | UDP-N-acetylglucosamine acyltransferase |
Protein accession | YP_001742309 |
Protein GI | 170679946 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000537445 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGATA AATCCGCCTT TGTGCATCCA ACCGCCATTG TGGAAGAGGG CGCGTCGATT GGCGCGAACG CTCACATTGG TCCTTTTTGT ATCGTTGGAC CCCATGTCGA AATTGGTGAG GGTACCGTAC TGAAATCTCA CGTTGTCGTG AATGGTCATA CTAAAATTGG CCGCGATAAT GAGATTTATC AGTTCGCCTC CATCGGCGAA GTTAACCAGG ATCTGAAATA TGCTGGCGAA CCGACCCGCG TGGAAATCGG CGATCGTAAC CGCATTCGCG AAAGCGTCAC CATTCATCGT GGCACAGTCC AGGGCGGTGG ATTGACGAAG GTGGGCAGCG ACAACTTACT GATGATCAAT GCGCACATTG CGCACGATTG TACGGTAGGT AACCGCTGCA TCCTCGCCAA CAACGCAACG CTGGCGGGTC ACGTATCGGT TGACGACTTC GCGATCATCG GCGGCATGAC CGCAGTCCAT CAGTTCTGCA TCATTGGTGC GCATGTGATG GTTGGCGGCT GCTCCGGTGT GGCGCAGGAC GTCCCTCCTT ATGTCATTGC GCAGGGTAAC CACGCAACGC CGTTCGGTGT CAATATCGAA GGGCTGAAGC GCCGCGGATT CAGCCGTGAG GCGATTACCG CTATCCGCAA TGCGTATAAG CTGATTTATC GTAGCGGTAA AACGCTCGAT GAAGTGAAAC CGGAAATTGC TGAACTGGCG GAAACATATC CGGAAGTGAA AGCCTTTACC GATTTCTTTG CACGCTCAAC GCGCGGTCTG ATTCGTTAA
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Protein sequence | MIDKSAFVHP TAIVEEGASI GANAHIGPFC IVGPHVEIGE GTVLKSHVVV NGHTKIGRDN EIYQFASIGE VNQDLKYAGE PTRVEIGDRN RIRESVTIHR GTVQGGGLTK VGSDNLLMIN AHIAHDCTVG NRCILANNAT LAGHVSVDDF AIIGGMTAVH QFCIIGAHVM VGGCSGVAQD VPPYVIAQGN HATPFGVNIE GLKRRGFSRE AITAIRNAYK LIYRSGKTLD EVKPEIAELA ETYPEVKAFT DFFARSTRGL IR
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