Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0190 |
Symbol | lpxD |
ID | 6147512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 210153 |
End bp | 211178 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615091 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001742307 |
Protein GI | 170683962 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000507466 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAA TTCGACTGGC TGATTTAGCG CAGCAGTTGG ATGCAGAACT ACACGGTGAT GGCGATATCG TCATCACCGG CGTTGCGTCC ATGCAATCTG CACAAACAGG TCACATTACG TTCATGGTTA ACCCAAAATA CCGTGAGCAT TTAGGCTTGT GCCAGGCGTC CGCGGTTGTC ATGACCCAGG ACGATCTTCC TTTCGCGAAA AGTGCCGCGC TGGTAGTGAA GAATCCCTAC CTGACTTACG CGCGCATGGC GCAAATTTTA GATACCACGC CGCAGCCCGC GCAGAACATT GCACCCAGTG CAGTGATTGA CGCGACGGCG AAGCTGGGTA ACAACGTCTC AATTGGCGCT AACGCGGTGA TTGAGTCCGG CGTTGAACTG GGCGATAACG TGATTATCGG TGCCGGTTGC TTCGTAGGTA AAAACAGCAA AATCGGTGCA GGTTCGCGTC TCTGGGCGAA CGTAACCATT TACCATGAGA TCCAGATCGG TCAGAATTGC CTGATCCAGT CCGGAACAGT GGTAGGCGCA GACGGCTTTG GTTATGCCAA CGATCGTGGT AACTGGGTGA AGATCCCGCA GATAGGTCGC GTAATTATTG GCGATCGCGT GGAGATCGGC GCATGTACTA CCATCGATCG CGGTGCGCTG GATGACACTG TTATTGGCAA TGGTGTGATC ATTGATAACC AGTGCCAGAT TGCACATAAC GTCGTGATTG GCGACAATAC GGCAGTTGCC GGTGGCGTCA TTATGGCGGG CAGCCTGAAA ATTGGTCGTT ACTGCATGAT CGGCGGAGCC AGCGTAATCA ACGGGCATAT GGAAATATGC GACAAAGTGA CGGTTACGGG CATGGGTATG GTGATGCGTC CCATCACTGA ACCAGGCGTC TATTCCTCAG GCATTCCGCT GCAACCCAAC AAAGTCTGGC GCAAAACCGC TGCACTGGTG ATGAACATTG ATGACATGAG CAAGCGTCTG AAATCGCTTG AGCGCAAGGT TAATCAACAA GACTAA
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Protein sequence | MPSIRLADLA QQLDAELHGD GDIVITGVAS MQSAQTGHIT FMVNPKYREH LGLCQASAVV MTQDDLPFAK SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA KLGNNVSIGA NAVIESGVEL GDNVIIGAGC FVGKNSKIGA GSRLWANVTI YHEIQIGQNC LIQSGTVVGA DGFGYANDRG NWVKIPQIGR VIIGDRVEIG ACTTIDRGAL DDTVIGNGVI IDNQCQIAHN VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KSLERKVNQQ D
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