Gene EcSMS35_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0145 
SymbolpanB 
ID6143937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp159170 
End bp159964 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID641615046 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_001742262 
Protein GI170682456 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAA CCACGATTGC TTCATTGCAG AAATGCAAGC AGGACAAAAA ACGTTTCGCA 
ACCATCACCG CTTACGACTA TAGCTTCGCA AAACTGTTTG CCGAAGAAGG ACTTAACGTC
ATGCTGGTAG GCGATTCACT GGGCATGACG GTTCAGGGGC ATGACTCCAC GCTACCGGTT
ACCGTTGCCG ATATCGCCTA TCACACCGCC GCTGTGCGTC GCGGCGCGCC AAACTGCCTT
CTGCTGGCTG ACCTGCCATT TATGGCGTAT GCCACGCCGG AACAAGCCTT TGAAAACGCC
GCAACGGTAA TGCGTGCCGG AGCCAACATG GTCAAAATTG AAGGCGGTGA GTGGCTGGTG
GAAACCGTAC AAATGCTGAC CGAACGTGCC GTTCCAGTTT GTGGTCATTT AGGCCTAACC
CCACAGTCAG TAAATATTTT CGGTGGCTAC AAAGTCCAGG GGCGCGGCGA TGAAGCGGGA
GATCAACTGC TCAGCGATGC ATTGGCATTA GAAGCTGCTG GGGCACAGCT GCTGGTACTG
GAGTGCGTGC CGGTTGAGCT GGCAAAACGC ATTACCGAAG CACTGGCGAT CCCGGTTATC
GGTATTGGCG CAGGCAACGT CACTGACGGG CAAATCCTCG TGATGCACGA CGCGTTCGGC
ATTACCGGCG GTCATATTCC TAAATTCGCC AAAAATTTCC TCGCCGAAAC GGGCGACATC
CGCGCGGCTG TGCGGCAGTA TATGGCTGAA GTGGAGTCCG GCGTTTACCC GGGCGAAGAA
CACAGTTTCC ATTAA
 
Protein sequence
MKPTTIASLQ KCKQDKKRFA TITAYDYSFA KLFAEEGLNV MLVGDSLGMT VQGHDSTLPV 
TVADIAYHTA AVRRGAPNCL LLADLPFMAY ATPEQAFENA ATVMRAGANM VKIEGGEWLV
ETVQMLTERA VPVCGHLGLT PQSVNIFGGY KVQGRGDEAG DQLLSDALAL EAAGAQLLVL
ECVPVELAKR ITEALAIPVI GIGAGNVTDG QILVMHDAFG ITGGHIPKFA KNFLAETGDI
RAAVRQYMAE VESGVYPGEE HSFH