Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0145 |
Symbol | panB |
ID | 6143937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 159170 |
End bp | 159964 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615046 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001742262 |
Protein GI | 170682456 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAA CCACGATTGC TTCATTGCAG AAATGCAAGC AGGACAAAAA ACGTTTCGCA ACCATCACCG CTTACGACTA TAGCTTCGCA AAACTGTTTG CCGAAGAAGG ACTTAACGTC ATGCTGGTAG GCGATTCACT GGGCATGACG GTTCAGGGGC ATGACTCCAC GCTACCGGTT ACCGTTGCCG ATATCGCCTA TCACACCGCC GCTGTGCGTC GCGGCGCGCC AAACTGCCTT CTGCTGGCTG ACCTGCCATT TATGGCGTAT GCCACGCCGG AACAAGCCTT TGAAAACGCC GCAACGGTAA TGCGTGCCGG AGCCAACATG GTCAAAATTG AAGGCGGTGA GTGGCTGGTG GAAACCGTAC AAATGCTGAC CGAACGTGCC GTTCCAGTTT GTGGTCATTT AGGCCTAACC CCACAGTCAG TAAATATTTT CGGTGGCTAC AAAGTCCAGG GGCGCGGCGA TGAAGCGGGA GATCAACTGC TCAGCGATGC ATTGGCATTA GAAGCTGCTG GGGCACAGCT GCTGGTACTG GAGTGCGTGC CGGTTGAGCT GGCAAAACGC ATTACCGAAG CACTGGCGAT CCCGGTTATC GGTATTGGCG CAGGCAACGT CACTGACGGG CAAATCCTCG TGATGCACGA CGCGTTCGGC ATTACCGGCG GTCATATTCC TAAATTCGCC AAAAATTTCC TCGCCGAAAC GGGCGACATC CGCGCGGCTG TGCGGCAGTA TATGGCTGAA GTGGAGTCCG GCGTTTACCC GGGCGAAGAA CACAGTTTCC ATTAA
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Protein sequence | MKPTTIASLQ KCKQDKKRFA TITAYDYSFA KLFAEEGLNV MLVGDSLGMT VQGHDSTLPV TVADIAYHTA AVRRGAPNCL LLADLPFMAY ATPEQAFENA ATVMRAGANM VKIEGGEWLV ETVQMLTERA VPVCGHLGLT PQSVNIFGGY KVQGRGDEAG DQLLSDALAL EAAGAQLLVL ECVPVELAKR ITEALAIPVI GIGAGNVTDG QILVMHDAFG ITGGHIPKFA KNFLAETGDI RAAVRQYMAE VESGVYPGEE HSFH
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