Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0138 |
Symbol | |
ID | 6145433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 153755 |
End bp | 154525 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615039 |
Product | ABC transporter, permease protein |
Protein accession | YP_001742255 |
Protein GI | 170679696 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATC TTTACTGGGT GGCGCTAAAA AGCATCTGGG CGAAAGAGAT CCATCGCTTT ATGCGTATCT GGGTGCAGAC GCTGGTGCCG CCAGTCATCA CCATGACCCT TTACTTTATT ATCTTCGGTA ACCTGATTGG TTCGCGTATT GGCGATATGC ATGGCTTCAG CTACATGCAG TTCATCGTAC CGGGGCTGAT CATGATGTCG GTGATCACCA ACGCCTACGC CAACGTCGCG TCATCATTTT TTGGTGCCAA GTTCCAGCGT AATATTGAAG AGCTGCTGGT AGCGCCGGTT CCGACTCATG TCATTATTGC CGGATATGTC GGTGGTGGCG TGGCGCGTGG TTTGTTTGTT GGTATTTTGG TGACGGCAAT TTCACTGTTT TTTGTGCCGT TTCAGGTGCA TTCGTGGGTA TTCGTTGCCT TAACCCTGGT GCTCACTGCG GTGCTATTCT CCCTTGCGGG TTTGCTGAAC GGCGTGTTTG CCAAAACGTT CGATGACATC AGCCTGGTGC CAACCTTTGT GTTAACGCCA CTCACGTATT TGGGCGGGGT CTTTTACTCC CTGACTTTGC TGCCGCCGTT CTGGCAGGGA CTGTCGCACC TGAACCCGAT CGTTTATATG ATCAGTGGTT TCCGCTACGG CTTCCTCGGT ATCAATGATG TGCCGCTGGT CACTACCTTT GGCGTACTGG TGGTCTTTAT TGTGGCGTTT TATTTGATTT GCTGGTCGCT GATCCAACGT GGGCGTGGTC TACGTAGCTA A
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Protein sequence | MMHLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GDMHGFSYMQ FIVPGLIMMS VITNAYANVA SSFFGAKFQR NIEELLVAPV PTHVIIAGYV GGGVARGLFV GILVTAISLF FVPFQVHSWV FVALTLVLTA VLFSLAGLLN GVFAKTFDDI SLVPTFVLTP LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG INDVPLVTTF GVLVVFIVAF YLICWSLIQR GRGLRS
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