Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0091 |
Symbol | murF |
ID | 6146512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 101283 |
End bp | 102641 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641614992 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_001742208 |
Protein GI | 170682834 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.667428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGCG TAACCCTTAG CCAACTTACC GATATTCTCA ACGGTGAACT GCAAGGTGCA GATATTACCC TTGATGCTGT AACCACTGAC ACGCGAAAAC TGACGCCGGG CTGCCTGTTT GTTGCCCTGA AAGGCGAACG TTTCGATGCT CATGATTTTG CCGACCAGGC GAAAGCTGGC GGCGCAGGCG CACTACTGGT TAGCCGTCCG CTGGATATCG ATCTGCCGCA GTTAATCGTC AAGGATACGC GTCTGGCGTT TGGTGAACTG GCTGCATGGG TTCGCCAGCA AGTTCCGGCG CGCGTGGTTG CTCTGACAGG TTCCTCCGGC AAAACATCCG TTAAAGAGAT GACGGCGGCG ATTTTAAGCC AGTGCGGCAA CACGCTTTAT ACGGCAGGCA ATCTCAACAA CGACATCGGC GTACCGATGA CGCTGTTGCG CTTAACGCCG GAATACGATT ACGCAGTTAT TGAACTTGGC GCGAACCATC AGGGCGAAAT TGCCTGGACT GTGAGTCTGA CTCGCCCGGA AGCGGCGCTG GTCAACAACC TGGCAGCGGC ACATCTGGAA GGTTTTGGCT CGCTTGCGGG TGTCGCGAAA GCGAAAGGTG AAATCTTTAG CGGCCTGCCG GAAAACGGTA TCGCCATCAT GAACGCTGAC AACAACGACT GGCTGAACTG GCAGAGCGTA ATTGGCTCAC GCAAAGTGTG GCGTTTCTCA CCCAATGCCG CCAACAGCGA TTTCACCGCC ACCAATATCC ATGTGACTTC GCACGGTACG GAATTTACCC TGCAAACCCC AACCGGTAGC GTGGATGTTC TGCTGCCGTT GCCGGGGCGT CACAATATTG CGAATGCGCT GGCAGCCGCT GCGCTCTCCA TGGCCGTGGG CGCAACGCTT GATGCTATCA AAGCGGGGCT GGCAAATCTG AAAGCTGTTC CAGGCCGTCT GTTCCCCATT CAACTGGTAG AAAACCAGTT GCTGCTCGAC GACTCCTACA ACGCCAATGT TGGTTCAATG ACTGCAGCAG TCCAGGTACT GGCTGAAATG CCGGGCTACC GCGTGCTGGT GGTGGGCGAT ATGGCGGAAC TGGGCGCTGA AAGCGAAGCC TGCCATATAC AGGTGGGCGA AGCGGCAAAA GCAGCTGGTA TTGACCGCGT GTTAAGCGTG GGCAAACAAA GCCATGCTAT CAGCACCGCC AGCGGCGTTG GCGAACATTT TTCCGATAAA ACTGCGCTTA TCGCGCGTCT TAAATCACTG ATTGCTGAGC AACAGGTAAT TACGATTTTA GTTAAGGGTT CACGTAGTGC TGCCATGGAA GAGGTAGTAC GCGCTTTACA GGAGAATGGG ACATGTTAG
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Protein sequence | MISVTLSQLT DILNGELQGA DITLDAVTTD TRKLTPGCLF VALKGERFDA HDFADQAKAG GAGALLVSRP LDIDLPQLIV KDTRLAFGEL AAWVRQQVPA RVVALTGSSG KTSVKEMTAA ILSQCGNTLY TAGNLNNDIG VPMTLLRLTP EYDYAVIELG ANHQGEIAWT VSLTRPEAAL VNNLAAAHLE GFGSLAGVAK AKGEIFSGLP ENGIAIMNAD NNDWLNWQSV IGSRKVWRFS PNAANSDFTA TNIHVTSHGT EFTLQTPTGS VDVLLPLPGR HNIANALAAA ALSMAVGATL DAIKAGLANL KAVPGRLFPI QLVENQLLLD DSYNANVGSM TAAVQVLAEM PGYRVLVVGD MAELGAESEA CHIQVGEAAK AAGIDRVLSV GKQSHAISTA SGVGEHFSDK TALIARLKSL IAEQQVITIL VKGSRSAAME EVVRALQENG TC
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