Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0066 |
Symbol | araC |
ID | 6143191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 75450 |
End bp | 76295 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641614967 |
Product | DNA-binding transcriptional regulator AraC |
Protein accession | YP_001742183 |
Protein GI | 170683703 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.269311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.445846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG CGCAAAATGA TCCCCTGCTG CCGGGATACT CGTTTAACGC CCATCTGGTG GCGGGTTTAA CGCCGATTGA GGCCAACGGT TATCTCGATT TTTTTATCGA CCGACCACTG GGAATGAAGG GTTATATTCT CAATCTCACC ATACGCGGCC AGGGGGTGGT GAAAAATCAG GGACGAGAAT TTGTCTGCCG ACCGGGTGAT ATTTTGCTGT TCCCGCCAGG AGAGATTCAT CACTACGGTC GTCATCCGGA GGCTCGCGAA TGGTATCACC AGTGGGTTTA CTTTCGTCCG CGCGCCTACT GGCATGAATG GCTTAACTGG CCGTCAATAT TTGCCAATAC GGGTTTCTTT CGCCCGGATG AAGCGCACCA GCCGCATTTC AGCGACCTGT TTGGGCAAAT CATTAACGCC GGGCAAGGGG AAGGGCGCTA TTCGGAATTG CTGGCGATAA ATCTGCTTGA GCAATTGTTA CTGCGGCGCA TGGAAGCGAT TAACGAGTCG CTCCACCCAC CGATGGATAA TCGGGTACGC GAGGCTTGTC AGTACATTAG CGATCATCTC GCAGACAGCA ATTTTGATAT CGCCAGCGTC GCACAGCATG TTTGCTTGTC GCCGTCGCGT CTGTCACATC TTTTCCGCCA GCAGTTAGGG ATTAGCGTCT TAAGCTGGCG CGAGGACCAA CGCATTAGTC AGGCGAAGCT GCTTTTGAGC ACCACCCGGA TGCCTATCGC CACCGTCGGT CGCAATGTTG GTTTTGACGA TCAACTCTAT TTCTCGCGAG TATTTAAAAA ATGCACCGGG GCCAGCCCGA GCGAGTTTAG GGCTGGATGT GAATAA
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Protein sequence | MAEAQNDPLL PGYSFNAHLV AGLTPIEANG YLDFFIDRPL GMKGYILNLT IRGQGVVKNQ GREFVCRPGD ILLFPPGEIH HYGRHPEARE WYHQWVYFRP RAYWHEWLNW PSIFANTGFF RPDEAHQPHF SDLFGQIINA GQGEGRYSEL LAINLLEQLL LRRMEAINES LHPPMDNRVR EACQYISDHL ADSNFDIASV AQHVCLSPSR LSHLFRQQLG ISVLSWREDQ RISQAKLLLS TTRMPIATVG RNVGFDDQLY FSRVFKKCTG ASPSEFRAGC E
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