| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0063 |
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| Symbol | araD |
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| ID | 6143158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 71003 |
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| End bp | 71698 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641614964 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_001742180 |
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| Protein GI | 170683189 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0680364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.805869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGAAG ATCTCAAACG CCAGATATTA GAAGCCAACC TGGCGCTGCC AAAACATAAC
CTGGTCACGC TCACATGGGG CAACGTCAGC GCCGTTGATC GCGAGCGCGG CGTCCTGGTG
ATCAAACCTT CCGGCGTCGA TTACAACGTC ATGACCGCTG ACGATATGGT CGTGGTCAGC
ATCGAAACCG GTGAAGTGGT TGAAGGAACG AAAAAGCCCT CCTCCGACAC GCCAACTCAC
CGGCTGCTCT ATCAGGCATT TCCGTCCATT GGCGGCATTG TGCACACACA CTCGCGCCAC
GCCACCATCT GGGCGCAGGC GGGTCAGTCG ATTCCAGCAA CCGGTACCAC CCACGCCGAC
TATTTCTACG GCACCATTCC CTGCACCCGA AAAATGACCG ACGCAGAAAT CAACGGTGAA
TATGAGTGGG AAACCGGTAA CGTCATCGTA GAAACCTTCG AAAAACAGGG TATCGATGCG
GCGCAAATGC CCGGCGTCCT GGTCCATTCT CACGGCCCAT TTGCATGGGG CAAAAATGCC
GAAGATGCAG TGCATAACGC CATCGTGCTG GAAGAGGTCG CTTATATGGG GATATTCTGC
CGTCAGTTAG CGCCGCAGTT ACCGGATATG CAGCAAACGC TGCTGGATAA ACACTATCTG
CGTAAGCATG GTGCGAAGGC ATATTACGGG CAGTAA
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| Protein sequence | MLEDLKRQIL EANLALPKHN LVTLTWGNVS AVDRERGVLV IKPSGVDYNV MTADDMVVVS
IETGEVVEGT KKPSSDTPTH RLLYQAFPSI GGIVHTHSRH ATIWAQAGQS IPATGTTHAD
YFYGTIPCTR KMTDAEINGE YEWETGNVIV ETFEKQGIDA AQMPGVLVHS HGPFAWGKNA
EDAVHNAIVL EEVAYMGIFC RQLAPQLPDM QQTLLDKHYL RKHGAKAYYG Q
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