Gene EcSMS35_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0052 
Symbol 
ID6142698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp56286 
End bp56885 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID641614953 
Producthypothetical protein 
Protein accessionYP_001742169 
Protein GI170684105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.79454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.653619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT ATTTTGAAAT ACGTGCTGAT TACAATCAGC ACACCATCAC GGTTTATCAG 
GCTTACAATG ATGCAATCGC TGACGTCGCC GTACGTGACG GGCGATTTGG CGCACCTTTT
TCATTCAACC GCATGACCTG GATTAAACCC TCTTTTATGT GGATGATGGA GCGTAGCAAC
TGGGGACTGA AAAAAGATCA ACAACGCATT CTCGCAATCC GAATCAAACG CACCTTCTTT
GATACATTGC TGGAACAAGC GGTGCTAACC ACGCCGGAAG CCCATGTCTA TCCACATGCA
GGAGTTTGGG AAACGTTATT TGCGCAAGCA AATGTATATG TTCAGTGGGA CCCAGAACGC
AGCATAAATG GCAAAAAACT GGAGCACCGA TCATTACAGC TTGGTATTTC TCGTAACTTG
ATCAGTCAAT TTAACGAAGA CGCCATTGTT GCCATTGATG ATCTGACGCC GCTGGTGCGA
AAGTGTCATA ACCTTTTGAT AAACGGTAAA ACAACACAGG CGAAATCCTT CCTGCCGCCA
GAAAAAATTT ATCCTGTTAG TGCAACTGCA AGAAAGGCTT GGGGAATGAA AAATTCCTGA
 
Protein sequence
MADYFEIRAD YNQHTITVYQ AYNDAIADVA VRDGRFGAPF SFNRMTWIKP SFMWMMERSN 
WGLKKDQQRI LAIRIKRTFF DTLLEQAVLT TPEAHVYPHA GVWETLFAQA NVYVQWDPER
SINGKKLEHR SLQLGISRNL ISQFNEDAIV AIDDLTPLVR KCHNLLINGK TTQAKSFLPP
EKIYPVSATA RKAWGMKNS