| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0047 |
|---|
| Symbol | |
|---|
| ID | 6145129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 50989 |
|---|
| End bp | 52320 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641614948 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001742164 |
|---|
| Protein GI | 170681587 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.454742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGT CCAGAAACTT TGACGATCTT AAATTCTCCT CTATTCACCG CCGCATTTTG
CTGTGGGGAA GCGGTGGTCC GTTTCTGGAT GGTTATGTAC TGGTAATGAT TGGCGTGGCG
CTGGAGCAAC TGACTCCGGC GCTGAAACTG GACGCTGACT GGATTGGCTT GCTGGGCGCG
GGAACGCTCG CCGGGCTGTT CGTTGGCACA TCGCTGTTTG GCTATATCTC CGATAAAGTC
GGACGGCGCA AAATGTTCCT CATTGATATC ATCGCCATCG GCGTGATATC TGTGGCGACG
ATGTTTGTCT CATCCCCCGT CGAACTGTTG GTGATGCGGG TACTTATCGG CATTGTCATC
GGTGCGGATT ATCCCATCGC CACCTCAATG ATCACCGAGT TCTCCAGTAC CCGTCAGCGG
GCGTTTTCCA TCAGCTTTAT TGCCGCGATG TGGTATGTCG GCGCGACCTG CGCCGATCTG
GTCGGTTACT GGCTTTATGA TGTGGAAGGT GGTTGGCGCT GGATGCTGGG TAGCGCAGCG
ATCCCCTGTT TGTTGATTTT GATTGGTCGA TTCGAACTGC CTGAATCTCC CCGCTGGTTG
TTACGCAAAG GGCGAGTAAA AGAGTGCGAA GAGATGATGA TAAAACTGTT TGGCGAACCG
GTGGCTTTCG ATGAAGAGCA GCCGCAGCAA ACCCGTTTTC GCGATCTGTT TAATCGCCGC
CATTTTCCTT TTGTTCTGTT TGTTGCCGCC ATCTGGACCT GCCAGGTGAT CCCCATGTTC
GCCATTTACA CCTTTGGCCC GCAAATCGTT GGTTTGTTGG GATTGGGAGT TGGCAAAAAC
GCGGCGTTGG GGAATGTGGT GATTAGCCTG TTCTTTATGC TTGGCTGTAT TCCGCCGATG
CTGTGGTTAA ACACCGCCGG ACGGCGTCCA TTGTTGATTG GCAGTTTTGC CATGATGACG
CTGGCGCTGG CGGTTTTGGG GCTGATCCCG GATATGGGGA TCTGGCTGGT AGTGATGGCA
TTTGCGGTGT ATGCCTTTTT CTCTGGCGGG CCGGGTAATT TGCAGTGGCT CTATCCTAAT
GAACTCTTCC CGACGGATAT CCGCGCCTCT GCCGTGGGCG TGATTATGTC CTTAAGCCGT
ATTGGCACCA TTGTTTCGAC CTGGGCACTG CCAATCTTTA TCAATAATTA CGGCATCAGT
AGCACCATGC TGATGGGGGC GGGTATCTCG CTATTTGGCT TGTTGATTTC CGTAGCGTTT
GCTCCGGAGA CTCGAGGGAT GTCACTGGCG CAGACCAGCA ATATGACGAT CCGCGGGCAG
AGAATGGGGT AA
|
|---|
| Protein sequence | MQPSRNFDDL KFSSIHRRIL LWGSGGPFLD GYVLVMIGVA LEQLTPALKL DADWIGLLGA
GTLAGLFVGT SLFGYISDKV GRRKMFLIDI IAIGVISVAT MFVSSPVELL VMRVLIGIVI
GADYPIATSM ITEFSSTRQR AFSISFIAAM WYVGATCADL VGYWLYDVEG GWRWMLGSAA
IPCLLILIGR FELPESPRWL LRKGRVKECE EMMIKLFGEP VAFDEEQPQQ TRFRDLFNRR
HFPFVLFVAA IWTCQVIPMF AIYTFGPQIV GLLGLGVGKN AALGNVVISL FFMLGCIPPM
LWLNTAGRRP LLIGSFAMMT LALAVLGLIP DMGIWLVVMA FAVYAFFSGG PGNLQWLYPN
ELFPTDIRAS AVGVIMSLSR IGTIVSTWAL PIFINNYGIS STMLMGAGIS LFGLLISVAF
APETRGMSLA QTSNMTIRGQ RMG
|
|---|
| |