Gene EcSMS35_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0045 
SymbolfixC 
ID6146602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp49360 
End bp50646 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content55% 
IMG OID641614946 
Productputative oxidoreductase FixC 
Protein accessionYP_001742162 
Protein GI170682933 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.820288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.96055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG ATATCTTTGA CGCCATCATC GTCGGTGCAG GGCTTGCCGG TTCGGTTGCC 
GCACTGGTGC TCGCCCGCGA AGGTGCGCAA GTGTTAGTTA TCGAGCGAGG CAATTCCGCA
GGTGCCAAGA ACGTCACCGG CGGGCGTCTC TATGCCCACA GTCTGGAACA CATTATTCCT
GGTTTCGCTG ACTCCGCCCC CGTAGAACGC CTGATCACCC ATGAAAAACT CGCGTTTATG
ACGGAAAAGT CAGCGATGAC TATGGACTAC TGCAATGGCG ACGAAACCTC GCCATCCCAG
CGTTCTTACT CCGTTTTGCG CAGTAAATTT GATGCCTGGC TGATGGAGCA GGCCGAAGAA
GCGGACGCGC AGTTAATTAC CGGGATCCGC GTCGATAACC TCGTACAGCG CGATGGCAAA
GTTGTCGGCG TAGAAGCTGA TGGCGATGTG ATTGAAGCGA AAACGGTGAT CCTTGCTGAT
GGGGTGAATT CCATCCTTGC CGAAAAGCTG GGGATGGCAA AACGCGTTAA ACCGACGGAT
GTGGCGGTTG GCGTGAAGGA ACTGATCGAG TTACCGAAGT CGGTTATCGA AGACCGTTTT
CAGTTGCAGG GTAATCAGGG CGCGGCTTGC CTGTTTGCGG GATCACCCAC CGATGGCCTG
ATGGGCGGTG GCTTCCTTTA TACCAATGAA AATACCCTGT CGCTGGGGCT GGTTTGTGGT
TTGCATCATC TGCATGACGC AAAAAAATCG GTGCCGCAAA TGCTGGAAGA TTTCAAACAA
CATCCGGCCG TTGCACCGCT GATCGCAGGC GGCAAGCTGG TGGAATATTC CGCTCACGTA
GTGCCGGAAG CAGGCATCAA CATGCTGCCG GAGTTGGTTG GTGACGGCGT ACTGATTGCC
GGTGATGCCG CCGGAATGTG TATGAACCTC GGTTTTACCA TTCGCGGTAT GGATCTGGCG
ATTGCCGCCG GGGAAGCAGC AGCAAAAACT GTGCTTTCAG CGATGAAAAG CGACGATTTC
AGTAAGCAAA AACTCGCGGA ATATCGTCAG CATCTTGAGA GTGGCCCGCT GCGCGATATG
CGCATGTACC AGAAACTACC GGCGTTCCTT GATAACCCAC GCATGTTTAA CGGCTACCCG
GAACTGGCGG TGGGCGTGGC GCGTGACCTG TTCACCATTG ACGGCAGTGC GCCGGAACTG
ATGCGCAAGA AAATCCTCCG CCACGGCAAG AAAGTGGGCT TCATCAATCT GATCAAGGAT
GGCATGAAAG GAGTGACCGT TTTATGA
 
Protein sequence
MSEDIFDAII VGAGLAGSVA ALVLAREGAQ VLVIERGNSA GAKNVTGGRL YAHSLEHIIP 
GFADSAPVER LITHEKLAFM TEKSAMTMDY CNGDETSPSQ RSYSVLRSKF DAWLMEQAEE
ADAQLITGIR VDNLVQRDGK VVGVEADGDV IEAKTVILAD GVNSILAEKL GMAKRVKPTD
VAVGVKELIE LPKSVIEDRF QLQGNQGAAC LFAGSPTDGL MGGGFLYTNE NTLSLGLVCG
LHHLHDAKKS VPQMLEDFKQ HPAVAPLIAG GKLVEYSAHV VPEAGINMLP ELVGDGVLIA
GDAAGMCMNL GFTIRGMDLA IAAGEAAAKT VLSAMKSDDF SKQKLAEYRQ HLESGPLRDM
RMYQKLPAFL DNPRMFNGYP ELAVGVARDL FTIDGSAPEL MRKKILRHGK KVGFINLIKD
GMKGVTVL