Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0040 |
Symbol | caiA |
ID | 6146162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 44423 |
End bp | 45565 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641614941 |
Product | crotonobetainyl-CoA dehydrogenase |
Protein accession | YP_001742157 |
Protein GI | 170680462 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTA ATTTAAATGA TGAGCAGGAA CTGTTTGTCG CCGGTATCCG CGAACTGATG GCCAGCGAAA ACTGGGAGGC CTATTTTGCC GAGTGCGACC GTGACAGCGT CTACCCGGAA CGTTTTGTCA AAGCACTGGC GGATATGGGT ATCGACAGTC TGCTGATCCC TGAAGAGCAC GGTGGTCTGG ACGCGGGGTT TGTTACTCTC GCCGCCGTGT GGATGGAGCT GGGACGTCTG GGGGCACCAA CCTATGTGCT GTACCAGTTG CCGGGCGGGT TCAATACCTT CCTGCGCGAA GGCACACAAG AGCAGATCGA CAAGATTATG GCTTTCCGCG GCACCGGTAA GCAGATGTGG AACTCAGCGA TTACCGAACC GGGTGCGGGC TCCGACGTGG GTAGCCTGAA AACGACTTAT ACCCGTAGAA ATGGTAAGAT TTATCTTAAT GGTAGTAAGT GTTTTATTAC CAGTAGCGCC TACACCCCGT ACATCGTGGT GATGGCGCGC GACGGGGCTT CTCCGGACAA ACCTGTCTAC ACCGAATGGT TTGTTGATAT GAGCAAACCG GGCATCAAAG TGACCAAACT TGAAAAGCTC GGTCTGCGTA TGGATAGCTG CTGTGAAATC ACTTTTGACG ACGTGGAACT GGACGAGAAA GACATGTTCG GTCGGGAAGG TAACGGCTTT AACCGCGTCA AAGAAGAGTT CGACCATGAA CGTTTCCTGG TAGCCCTGAC CAACTACGGT ACGGCGATGT GCGCCTTTGA AGATGCGGCG CGCTACGCCA ACCAGCGTGT GCAGTTTGGC GAGGCTATTG GTCGTTTCCA GTTGATTCAG GAAAAATTCG CCCACATGGC GATCAAATTA AACTCCATGA AAAACATGCT GTATGAAGCA GCGTGGAAAG CAGACAACGG CACCATCACC TCTGGCGATG CAGCGATGTG CAAATACTTC TGCGCCAATG CGGCATTTGA AGTGGTGGAT AGCGCAATGC AGGTGCTGGG CGGTGTCGGG ATTGCGGGCA ACCACCGCAT CAGCCGCTTC TGGCGTGACC TGCGTGTAGA CCGCGTTTCC GGAGGATCTG ACGAAATGCA GATCCTGACG CTGGGTCGCG CGGTGCTGAA GCAATACCGC TAA
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Protein sequence | MDFNLNDEQE LFVAGIRELM ASENWEAYFA ECDRDSVYPE RFVKALADMG IDSLLIPEEH GGLDAGFVTL AAVWMELGRL GAPTYVLYQL PGGFNTFLRE GTQEQIDKIM AFRGTGKQMW NSAITEPGAG SDVGSLKTTY TRRNGKIYLN GSKCFITSSA YTPYIVVMAR DGASPDKPVY TEWFVDMSKP GIKVTKLEKL GLRMDSCCEI TFDDVELDEK DMFGREGNGF NRVKEEFDHE RFLVALTNYG TAMCAFEDAA RYANQRVQFG EAIGRFQLIQ EKFAHMAIKL NSMKNMLYEA AWKADNGTIT SGDAAMCKYF CANAAFEVVD SAMQVLGGVG IAGNHRISRF WRDLRVDRVS GGSDEMQILT LGRAVLKQYR
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