Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0032 |
Symbol | carA |
ID | 6144305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 34771 |
End bp | 35946 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641614933 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001742149 |
Protein GI | 170683312 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAAT ATTCTCTGGA GGGTGTTTTG ATTAAGTCAG CGCTATTGGT TCTGGAAGAC GGAACCCAGT TTCACGGTCG GGCCATAGGG GCAACAGGTT CGGCGGTTGG GGAAGTCGTT TTCAATACTT CAATGACCGG TTATCAAGAA ATCCTCACTG ATCCTTCCTA TTCTCGTCAA ATCGTTACTC TTACTTATCC CCATATTGGC AATGTCGGCA CTAATGACGC CGATGAAGAA TCTTCTCAGG TACATGCACA AGGTCTGGTG ATTCGCGACC TGCCGCTGAT TGCCAGCAAC TTCCGTAATA CCGAAGACCT CTCTTCTTAC CTGAAGCGCC ATAACATCGT GGCGATTGCC GATATCGATA CCCGTAAGCT GACGCGTTTA CTGCGCGAGA AAGGCGCACA GAATGGCTGC ATTATCGCGG GCGATAACCC GGATGCGGCG CTGGCGTTAG AAAAAGCCCG CGCGTTCCCA GGTCTGAACG GCATGGATCT GGCAAAAGAA GTGACCACCG CAGAAACGTA TAGCTGGACA CAAGGGAGCT GGACGCTGAC CGGCGGCCTG CCAGAAGCGA AGAAAGAAGA CGAGCTGCCG TTCCATGTTG TGGCTTATGA TTTTGGTGCC AAGCGCAACA TCCTGCGCAT GTTGGTGGAC AGAGGCTGTC GTCTGACTAT CGTTCCGGCG CAAACTTCTG CGGAAGATGT GTTGAAAATG AATCCAGACG GCATCTTCCT CTCCAACGGC CCTGGCGACC CGGCCCCATG CGATTACGCC ATTACCGCCA TCCAGAAATT CCTCGAAACC GATATTCCGG TATTCGGCAT CTGCCTCGGT CATCAGCTGC TGGCGCTGGC GAGCGGTGCG AAGACTGTCA AAATGAAATT TGGTCACCAC GGCGGCAACC ATCCGGTTAA AGATGTTGAG AAAAACGTGG TGATGATCAC CGCCCAGAAC CACGGTTTTG CGGTGGATGA AGCAACATTA CCTGCAAACC TGCGTGTCAC GCATAAATCC CTGTTCGACG GTACGTTACA GGGCATTCAT CGCACCGATA AACCGGCGTT CAGCTTCCAG GGTCACCCGG AAGCCAGCCC TGGTCCACAC GACGCCGCGC CGTTGTTCGA CCACTTTATC GAGTTAATTG AGCAGTACCG TAAAACCGCT AAGTAA
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Protein sequence | MSEYSLEGVL IKSALLVLED GTQFHGRAIG ATGSAVGEVV FNTSMTGYQE ILTDPSYSRQ IVTLTYPHIG NVGTNDADEE SSQVHAQGLV IRDLPLIASN FRNTEDLSSY LKRHNIVAIA DIDTRKLTRL LREKGAQNGC IIAGDNPDAA LALEKARAFP GLNGMDLAKE VTTAETYSWT QGSWTLTGGL PEAKKEDELP FHVVAYDFGA KRNILRMLVD RGCRLTIVPA QTSAEDVLKM NPDGIFLSNG PGDPAPCDYA ITAIQKFLET DIPVFGICLG HQLLALASGA KTVKMKFGHH GGNHPVKDVE KNVVMITAQN HGFAVDEATL PANLRVTHKS LFDGTLQGIH RTDKPAFSFQ GHPEASPGPH DAAPLFDHFI ELIEQYRKTA K
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