| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0018 |
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| Symbol | nhaR |
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| ID | 6143420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 21176 |
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| End bp | 22081 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641614919 |
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| Product | transcriptional activator NhaR |
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| Protein accession | YP_001742135 |
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| Protein GI | 170681624 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.278045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATGT CTCATATCAA TTACAACCAC TTGTATTACT TCTGGCATGT CTATAAAGAA
GGTTCCGTGG TTGGCGCAGC GGAGGCGCTT TATTTAACAC CACAAACCAT TACCGGACAG
ATTCGGGCGC TGGAAGAGCG CCTGCAAGGC AAATTATTTA AGCGCAAGGG ACGTGGCCTC
GAGCCCAGCG AGCTGGGAGA GCTGGTCTAT CGCTATGCCG ATAAAATGTT CACCTTAAGC
CAGGAAATGC TGGATATCGT GAACTATCGC AAAGAATCCA ATTTATTGTT TGACGTTGGC
GTGGCTGATG CACTTTCTAA ACGCCTGGTC AGTAGCGTAC TTAACGCCGC AGTGGTAGAA
GGCGAGCCGA TTCATCTTCG CTGCTTCGAA TCCACCCACG AAATGCTGCT GGAGCAATTA
AGTCAGCATA AACTGGATAT GATCATTTCC GACTGTCCGA TAGATTCTAC GCAGCAGGAA
GGTCTGTTCT CCGTGAGAAT TGGCGAATGT GGCGTGAGTT TCTGGTGTAC AAATCCACCA
CCGGAAAAAC CGTTCCCGGC TTGTCTGGAA GAACGGCGGC TTTTGATTCC TGGGCGACGT
TCAATGTTAG GGCGCAAATT GCTTAACTGG TTTAACTCCC AGGGATTAAA CGTAGAAATC
CTCGGCGAGT TTGATGATGC CGCGTTGATG AAAGCTTTTG GTGCGATGCA CAATGCAATC
TTCGTTGCCC CAACGCTTTA TGCATATGAC TTTTATGCCG ATAAAACTGT CGTAGAAATT
GGTCGCGTCG AAAATGTGAT GGAAGAGTAC CATGCTATTT TTGCTGAGCG GATGATTCAG
CACCCGGCGG TACAGCGAAT CTGCAATACG GATTATTCTT CGTTGTTTTC TCCCGCCTCA
CGATAG
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| Protein sequence | MSMSHINYNH LYYFWHVYKE GSVVGAAEAL YLTPQTITGQ IRALEERLQG KLFKRKGRGL
EPSELGELVY RYADKMFTLS QEMLDIVNYR KESNLLFDVG VADALSKRLV SSVLNAAVVE
GEPIHLRCFE STHEMLLEQL SQHKLDMIIS DCPIDSTQQE GLFSVRIGEC GVSFWCTNPP
PEKPFPACLE ERRLLIPGRR SMLGRKLLNW FNSQGLNVEI LGEFDDAALM KAFGAMHNAI
FVAPTLYAYD FYADKTVVEI GRVENVMEEY HAIFAERMIQ HPAVQRICNT DYSSLFSPAS
R
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