| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0017 |
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| Symbol | nhaA |
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| ID | 6146923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 19950 |
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| End bp | 21116 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641614918 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_001742134 |
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| Protein GI | 170684120 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.453914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACATC TGCATCGATT CTTTAGCAGT GATGCCTCGG GAGGCATTAT TCTTATCATT
GCCGCTATCC TGGCGATGAT TATGGCCAAT AGCGGCGCAA CCAGTGGATG GTATCACGAC
TTTCTGGAGA CGCCGGTTCA GCTCCGGGTT GGTTCACTCG AAATCAACAA AAACATGCTG
TTATGGATAA ATGACGCGCT GATGGCGGTA TTTTTCCTGT TAGTCGGTCT GGAAGTTAAA
CGTGAACTGA TGCAAGGATC GCTAGCCAGC TTACGCCAGG CCGCATTTCC AGTTATCGCC
GCTATTGGTG GGATGATTGT GCCGGCATTG CTCTATCTGG CCTTTAACTA TGCCGATCCG
ATTACCCGCG AAGGGTGGGC GATCCCGGCG GCTACTGACA TTGCCTTTGC ACTTGGTGTG
CTGGCGCTGT TGGGAAGTCG TGTTCCGTTA GCGCTGAAGA TCTTTTTGAT GGCTCTGGCT
ATTATCGACG ATCTTGGGGC CATCATTATC ATCGCATTGT TCTACACTAA TGACTTATCG
ATGGCGTCTC TCGGCGTTGC GGCAGTAGCG ATTGCCGTAC TCGCGGTACT GAATATCTGT
GGTGTTCGTC GCACGGGCGT TTATATTCTG GTTGGCGTGG TACTGTGGAC AGCGGTGTTG
AAATCAGGTG TCCATGCAAC GCTGGCTGGC GTCATTGTCG GCTTCTTTAT TCCGTTAAAA
GAGAAGCATG GGCGCTCTCC GGCTAAACGT CTGGAGCATG TTTTGCATCC GTGGGTGGCA
TATCTGATTT TGCCGTTGTT TGCGTTTGCC AATGCGGGGG TATCTCTGCA AGGCGTGACG
CTGGATGGCC TGACCTCCAT TCTGCCATTA GGGATCATCG CCGGTTTGCT GATTGGCAAG
CCACTGGGTA TTAGTCTGTT CTGCTGGTTG GCGCTGCGTT TGAAACTGGC GCATCTGCCT
GAGGGAACGA CTTATCAGCA AATTATGGCG GTGGGGATCC TATGCGGTAT CGGTTTTACT
ATGTCTATCT TTATTGCCAG CCTTGCCTTT GGTAGCGTAG ATCCAGAACT GATTAACTGG
GCGAAACTCG GTATCCTGGT CGGTTCTATC TCTTCGGCGG TAATTGGATA CAGCTGGTTA
CGCGTTCGTT TGCGTCCATC AGTTTGA
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| Protein sequence | MKHLHRFFSS DASGGIILII AAILAMIMAN SGATSGWYHD FLETPVQLRV GSLEINKNML
LWINDALMAV FFLLVGLEVK RELMQGSLAS LRQAAFPVIA AIGGMIVPAL LYLAFNYADP
ITREGWAIPA ATDIAFALGV LALLGSRVPL ALKIFLMALA IIDDLGAIII IALFYTNDLS
MASLGVAAVA IAVLAVLNIC GVRRTGVYIL VGVVLWTAVL KSGVHATLAG VIVGFFIPLK
EKHGRSPAKR LEHVLHPWVA YLILPLFAFA NAGVSLQGVT LDGLTSILPL GIIAGLLIGK
PLGISLFCWL ALRLKLAHLP EGTTYQQIMA VGILCGIGFT MSIFIASLAF GSVDPELINW
AKLGILVGSI SSAVIGYSWL RVRLRPSV
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