Gene EcSMS35_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0010 
Symbol 
ID6144778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp10529 
End bp11242 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID641614911 
Producthypothetical protein 
Protein accessionYP_001742127 
Protein GI170683397 
COG category[S] Function unknown 
COG ID[COG4735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.642715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTA ATTACCTGAA TGATTCAGAT CTGGATTTTC TCCAGCATTG TAGTGAGGAA 
CAATTGGCAA ATTTCGCCCG GCTGCTCACC CATAATGAAA AAGGCAAAAC TCGCCTCTCC
AGCGTACTGA TGCGCAACGA ACTGTTTAAA TCGATGGAAG GACATCCCGA GCAACACCGC
CGCAACTGGC AGCTGATTGC CGGAGAATTA CAACATTTTG GTGGCGATAG TATCGCCAAC
AAACTGCGCG GACACGGTAA ATTGTATCGG GCCATTTTGC TCGATGTTTC AAAACGATTG
AAGCTGAAAG CCGACAAAGA GATGTCTACG TTTGAAATTG AGCAACAGTT ACTGGAACAA
TTTCTGCGTA ATACCTGGAA GAAAATGGAC GAGGAACATA AGCAGGAGTT TCTGCACGCG
GTCGATGCCA GGGTGAATGA GCTGGAAGAG CTGCTGCCGC TGCTGATGAA AGACAAATTA
TTGGCAAAAG GCGTGTCGCA TTTGCTTTCC AGCCAATTGA CCCGCATTTT ACGCACCCAC
GCAGCAATGA GCGTACTTGG GCATGGTTTG CTGCGCGGCG CGGGGCTGGG AGGCCCTGTA
GGCGCGGCAC TAAATGGGGT TAAAGCGGTC AGCGGCAGCG CCTATCGCGT GACGATTCCA
GCCGTACTGC AAATCGCCTG CCTGCGCCGG ATGGTTAGTG CCACTCAGGT CTGA
 
Protein sequence
MNVNYLNDSD LDFLQHCSEE QLANFARLLT HNEKGKTRLS SVLMRNELFK SMEGHPEQHR 
RNWQLIAGEL QHFGGDSIAN KLRGHGKLYR AILLDVSKRL KLKADKEMST FEIEQQLLEQ
FLRNTWKKMD EEHKQEFLHA VDARVNELEE LLPLLMKDKL LAKGVSHLLS SQLTRILRTH
AAMSVLGHGL LRGAGLGGPV GAALNGVKAV SGSAYRVTIP AVLQIACLRR MVSATQV