Gene EcSMS35_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0009 
Symbol 
ID6147415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp9814 
End bp10380 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID641614910 
Producthypothetical protein 
Protein accessionYP_001742126 
Protein GI170680604 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA CTAAGTTGGC TAATCCGGCA CCGCTGGGCC TGATGGGCTT CGGCATGACC 
ACCATTCTGC TTAACCTGCA CAACGTGGGT TATTTCGCTC TTGACGGTAT TATTCTTGCA
ATGGGCATTT TCTACGGCGG CATCGCGCAA ATTTTTGCTG GTCTGCTGGA GTACAAAAAA
GGCAACACTT TCGGTTTAAC CGCATTCACC TCTTACGGTT CTTTCTGGCT GACGCTGGTT
GCGATTCTGC TGATGCCGAA ACTGGGTCTG ACCGATGCGC CAAATGCACA GTTCCTTGGT
GTCTACCTGG GTCTGTGGGG CGTATTTACG CTGTTTATGT TCTTCGGCAC GCTGAAAGGC
GCACGCGTTC TGCAATTCGT TTTCTTTAGC CTGACCGTGC TGTTTGCCCT GCTGGCGATC
GGTAACATTG TCGGTAATGC CGCGATCATC CACTTTGCCG GCTGGATTGG TCTGATCTGC
GGTGCCAGCG CAATCTATCT GGCGATGGGT GAAGTGCTGA ACGAGCAGTT TGGTCGCACC
GTTCTGCCGA TTGGTGAATC GCACTAA
 
Protein sequence
MGNTKLANPA PLGLMGFGMT TILLNLHNVG YFALDGIILA MGIFYGGIAQ IFAGLLEYKK 
GNTFGLTAFT SYGSFWLTLV AILLMPKLGL TDAPNAQFLG VYLGLWGVFT LFMFFGTLKG
ARVLQFVFFS LTVLFALLAI GNIVGNAAII HFAGWIGLIC GASAIYLAMG EVLNEQFGRT
VLPIGESH