Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0009 |
Symbol | |
ID | 6147415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 9814 |
End bp | 10380 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641614910 |
Product | hypothetical protein |
Protein accession | YP_001742126 |
Protein GI | 170680604 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACA CTAAGTTGGC TAATCCGGCA CCGCTGGGCC TGATGGGCTT CGGCATGACC ACCATTCTGC TTAACCTGCA CAACGTGGGT TATTTCGCTC TTGACGGTAT TATTCTTGCA ATGGGCATTT TCTACGGCGG CATCGCGCAA ATTTTTGCTG GTCTGCTGGA GTACAAAAAA GGCAACACTT TCGGTTTAAC CGCATTCACC TCTTACGGTT CTTTCTGGCT GACGCTGGTT GCGATTCTGC TGATGCCGAA ACTGGGTCTG ACCGATGCGC CAAATGCACA GTTCCTTGGT GTCTACCTGG GTCTGTGGGG CGTATTTACG CTGTTTATGT TCTTCGGCAC GCTGAAAGGC GCACGCGTTC TGCAATTCGT TTTCTTTAGC CTGACCGTGC TGTTTGCCCT GCTGGCGATC GGTAACATTG TCGGTAATGC CGCGATCATC CACTTTGCCG GCTGGATTGG TCTGATCTGC GGTGCCAGCG CAATCTATCT GGCGATGGGT GAAGTGCTGA ACGAGCAGTT TGGTCGCACC GTTCTGCCGA TTGGTGAATC GCACTAA
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Protein sequence | MGNTKLANPA PLGLMGFGMT TILLNLHNVG YFALDGIILA MGIFYGGIAQ IFAGLLEYKK GNTFGLTAFT SYGSFWLTLV AILLMPKLGL TDAPNAQFLG VYLGLWGVFT LFMFFGTLKG ARVLQFVFFS LTVLFALLAI GNIVGNAAII HFAGWIGLIC GASAIYLAMG EVLNEQFGRT VLPIGESH
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