Gene EcHS_A4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4610 
SymbolosmY 
ID5594922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp4614711 
End bp4615316 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID640923704 
Productperiplasmic protein 
Protein accessionYP_001461141 
Protein GI157163823 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0762495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGA CAAGACTGAA GATTTCGAAA ACTCTGCTGG CTGTAATGTT GACCTCTGCC 
GTCGCGACCG GCTCTGCCTA CGCGGAAAAC AACGCACAGA CTACCAATGA AAGCGCAGGG 
CAAAAAGTCG ATAGCTCTAT GAATAAAGTC GGTAATTTCA TGGATGACAG CGCCATCACC 
GCGAAAGTGA AGGCGGCGCT GGTGGATCAT GACAACATCA AGAGCACCGA TATCTCTGTC 
AAAACCGATC AAAAAGTCGT GACCCTGAGC GGTTTCGTTG AAAGCCAGGC TCAGGCCGAA 
GAGGCAGTGA AAGTGGCGAA AGGCGTTGAA GGGGTGACCT CTGTCAGCGA CAAACTGCAC 
GTTCGCGACG CTAAAGAAGG CTCTGTGAAG GGCTACGCGG GTGACACCGC CACCACCAGT 
GAAATCAAAG CCAAACTGCT GGCGGACGAT ATCGTCCCTT CCCGTCATGT GAAAGTTGAA 
ACCACCGACG GCGTGGTTCA GCTCTCCGGT ACCGTCGATT CCCAGGCACA GAGCGACCGT 
GCTGAAAGTA TCGCCAAAGC GGTAGATGGT GTGAAAAGCG TTAAAAATGA TCTGAAAACT 
AAGTAA
 
Protein sequence
MTMTRLKISK TLLAVMLTSA VATGSAYAEN NAQTTNESAG QKVDSSMNKV GNFMDDSAIT 
AKVKAALVDH DNIKSTDISV KTDQKVVTLS GFVESQAQAE EAVKVAKGVE GVTSVSDKLH 
VRDAKEGSVK GYAGDTATTS EIKAKLLADD IVPSRHVKVE TTDGVVQLSG TVDSQAQSDR 
AESIAKAVDG VKSVKNDLKT K