Gene EcHS_A4467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4467 
SymbolcpdB 
ID5594053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp4469775 
End bp4471718 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content49% 
IMG OID640923565 
Productbifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 
Protein accessionYP_001461006 
Protein GI157163688 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID[TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGT TTAGCGCAAC GCTCCTGGCC ACGCTGATTG CCGCCAGTGT GAATGCAGCG 
ACGGTCGATC TGCGTATCAT GGAAACCACT GATCTGCATA GCAACATGAT GGATTTCGAT 
TATTACAAAG ACACCGCCAC GGAAAAGTTC GGACTGGTAC GCACCGCAAG CCTGATTAAC 
GATGCCCGCA ATGAAGTCAA AAATAGCGTG CTGGTGGATA ACGGCGACTT GATCCAGGGA 
AGTCCGCTGG CCGATTACAT GTCGGCGAAA GGATTAAAAG CCGGAGATAT TCACCCGGTC 
TATAAGGCAT TAAATACGCT GGACTATACC GTCGGCACGC TTGGCAACCA CGAGTTTAAC 
TACGGTCTGG ATTACCTGAA AAATGCGTTG GCAGGAGCGA AATTCCCTTA TGTAAATGCC 
AACGTCATTG ACGCAAAAAC CAAACAGCCC ATGTTTACAC CGTATTTAAT TAAAGACACC 
GAAGTGGTCG ATAAAGACGG AAAAAAACAG ACGTTAAAGA TTGGCTATAT TGGCGTCGTG 
CCGCCGCAGA TTATGGGGTG GGATAAAGCC AATTTGTCCG GCAAAGTCAC CGTTAACGAT 
ATAACAGAAA CTGTGCGCAA ATACGTGCCT GAAATGCGTG AGAAAGGTGC CGATCTCGTT 
GTCGTTCTGG CGCATTCCGG GCTGTCTGCC GATCCGTATA AAGTGATGGC GGAAAACTCA 
GTTTATTATC TCAGTGAAAT TCCGGGTGTT GACGCCATTA TGTTTGGCCA TGCTCACGCC 
GTTTTCCCAA GTAAAGATTT TGCTGATATC GAAGGAGCTG ATATCGCGAA AGGCACGCTG 
AATGGTGTTC CGGCGGTAAT GCCAGGCATG TGGGGCGATC ATCTTGGTGT GGTCGACTTA 
CAACTCAGTA ATGACAGCGG TAAATGGCAG GTGACGCAGG CGAAAGCGGA AGCACGACCG 
ATTTACGACA TCGCTAATAA AAAATCCCTC GCGGCGGAAG ACAGCAAGCT GGTAGAAACA 
CTCAAAGCCG ATCACGATGC CACACGCCAG TTCGTCAGCA AGCCAATCGG TAAATCTGCC 
GACAATATGT ATAGCTATCT GGCACTGGTG CAGGACGATC CGACCGTGCA GGTGGTGAAC 
AACGCGCAAA AAGCGTATGT CGAGCATTAC ATTCAGAGCG ATCCGGATCT GGCAAAACTG 
CCAGTGCTTT CAGCTGCCGC ACCGTTTAAA GTTGGTGGTC GCAAAAATGA CCCGGCAAGC 
TATGTGGAGG TGGAAAAAGG CCAGTTGACC TTCCGTAATG CCGCCGATCT TTATCTCTAC 
CCCAATACGC TGATTGTGGT GAAAGCCAGC GGTAAAGAGG TGAAAGAGTG GCTGGAATGC 
TCTGCCGGAC AGTTTAACCA GATTGATCCT AACAGCACGA AACCACAGTC ACTCATTAAC 
TGGGATGGTT TCCGCACTTA TAACTTTGAT GTGATTGATG GTGTGAATTA TCAGATTGAT 
GTTACCCAAC CCGCCCGTTA TGACGGCGAG TGCCAGATGA TTAATGCCAA TGCGGAAAGG 
ATTAAGAACC TGACCTTTAA CGGCAAGCCG ATTGATCCGA ACGCCATGTT CCTCGTTGCC 
ACCAATAACT ATCGCGCTTA CGGCGGCAAA TTTGCCGGTA CGGGCGACAG CCATATCGCT 
TTTGCTTCAC CGGATGAGAA CCGCTCGGTG CTGGCAGCGT GGATTGCTGA TGAGTCGAAA 
CGTGCGGGGG AAATTCACCC GGCGGCAGAT AACAACTGGC GTTTAGCACC GATAGCCGGC 
GATAAGAAAC TGGATATCCG TTTCGAAACT TCCCCGTCAG ATAAAGCCGC AGCGTTTATT 
AAAGAGAAAG GGCAATATCC GATGAATAAA GTCGCGACCG ATGATATCGG GTTTGCGATT 
TATCAGGTGG ATTTGAGTAA GTAA
 
Protein sequence
MIKFSATLLA TLIAASVNAA TVDLRIMETT DLHSNMMDFD YYKDTATEKF GLVRTASLIN 
DARNEVKNSV LVDNGDLIQG SPLADYMSAK GLKAGDIHPV YKALNTLDYT VGTLGNHEFN 
YGLDYLKNAL AGAKFPYVNA NVIDAKTKQP MFTPYLIKDT EVVDKDGKKQ TLKIGYIGVV 
PPQIMGWDKA NLSGKVTVND ITETVRKYVP EMREKGADLV VVLAHSGLSA DPYKVMAENS 
VYYLSEIPGV DAIMFGHAHA VFPSKDFADI EGADIAKGTL NGVPAVMPGM WGDHLGVVDL 
QLSNDSGKWQ VTQAKAEARP IYDIANKKSL AAEDSKLVET LKADHDATRQ FVSKPIGKSA 
DNMYSYLALV QDDPTVQVVN NAQKAYVEHY IQSDPDLAKL PVLSAAAPFK VGGRKNDPAS 
YVEVEKGQLT FRNAADLYLY PNTLIVVKAS GKEVKEWLEC SAGQFNQIDP NSTKPQSLIN 
WDGFRTYNFD VIDGVNYQID VTQPARYDGE CQMINANAER IKNLTFNGKP IDPNAMFLVA 
TNNYRAYGGK FAGTGDSHIA FASPDENRSV LAAWIADESK RAGEIHPAAD NNWRLAPIAG 
DKKLDIRFET SPSDKAAAFI KEKGQYPMNK VATDDIGFAI YQVDLSK