| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4458 |
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| Symbol | cycA |
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| ID | 5592850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 4462957 |
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| End bp | 4464360 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640923556 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_001460997 |
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| Protein GI | 157163679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000000362617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATC AGGTAAAAGT CGTTGCCGAT GATCAGGCTC CGGCTGAACA GTCGCTACGG
CGCAATCTCA CAAACCGACA TATTCAGCTT ATTGCCATTG GCGGTGCCAT TGGTACGGGG
TTGTTTATGG GGTCCGGCAA AACGATTAGC CTTGCCGGGC CGTCGATCAT TTTCGTTTAT
ATGATCATTG GTTTTATGCT CTTTTTCGTG ATGCGGGCAA TGGGGGAATT GCTGCTTTCG
AATCTGGAAT ACAAATCTTT TAGTGACTTC GCTTCCGATT TACTCGGGCC GTGGGCAGGA
TATTTCACCG GCTGGACCTA CTGGTTCTGC TGGGTTGTAA CCGGTATGGC AGACGTGGTG
GCGATCACGG CTTATGCTCA GTTCTGGTTC CCCGATCTCT CCGACTGGGT CGCCTCGCTG
GCGGTGATAG TGCTGCTGCT GACGCTCAAC CTTGCCACCG TGAAAATGTT CGGTGAGATG
GAGTTCTGGT TTGCGATGAT CAAAATCGTC GCCATCGTGT CGCTGATTGT CGTCGGCCTG
GTCATGGTGG CGATGCACTT TCAGTCACCG ACCGGTGTGG AAGCGTCATT CGCGCATTTG
TGGAATGACG GCGGCTGGTT CCCGAAAGGT TTAAGTGGCT TCTTTGCCGG ATTCCAGATA
GCGGTTTTCG CTTTCGTGGG GATTGAGCTG GTAGGTACTA CAGCTGCGGA AACCAAAGAT
CCGGAGAAAT CACTGCCACG CGCGATTAAC TCCATTCCGA TCCGTATCAT TATGTTCTAC
GTCTTCGCGC TGATTGTGAT TATGTCCGTG ACGCCGTGGA GTTCGGTAGT CCCGGAGAAA
AGCCCGTTCG TTGAGCTGTT TGTGTTGGTA GGTTTGCCTG CGGCTGCCAG CGTGATCAAC
TTTGTGGTGC TGACCTCTGC GGCGTCTTCC GCTAACAGCG GTGTCTTCTC TACCAGCCGT
ATGCTGTTTG GTCTGGCGCA GGAAGGTGTT GCGCCGAAAG CGTTCGCTAA ACTCTCTAAG
CGCGCAGTAC CCGCGAAAGG GCTGACCTTC TCCTGCATCT GTCTGCTCGG CGGCGTGGTG
ATGCTGTATG TGAATCCCAG CGTGATTGGC GCGTTCACGA TGATCACGAC GGTTTCCGCG
ATTCTGTTTA TGTTCGTCTG GACGATTATC CTTTGCTCGT ACCTGGTGTA TCGCAAACAG
CGTCCTCATC TGCATGAGAA GTCGATCTAC AAGATGCCGC TCGGCAAGCT GATGTGCTGG
GTATGTATGG CGTTCTTTGT GTTCGTGATC GTGCTGCTGA CACTGGAAGA TGACACTCGC
CAGGCGCTGC TGGTTACCCC GCTGTGGTTT ATCGCGCTGG GGTTGGGCTG GCTGTTTATT
GGTAAAAAAC GCATGGCGAA GTAA
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| Protein sequence | MVDQVKVVAD DQAPAEQSLR RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS LAGPSIIFVY
MIIGFMLFFV MRAMGELLLS NLEYKSFSDF ASDLLGPWAG YFTGWTYWFC WVVTGMADVV
AITAYAQFWF PDLSDWVASL AVIVLLLTLN LATVKMFGEM EFWFAMIKIV AIVSLIVVGL
VMVAMHFQSP TGVEASFAHL WNDGGWFPKG LSGFFAGFQI AVFAFVGIEL VGTTAAETKD
PEKSLPRAIN SIPIRIIMFY VFALIVIMSV TPWSSVVPEK SPFVELFVLV GLPAAASVIN
FVVLTSAASS ANSGVFSTSR MLFGLAQEGV APKAFAKLSK RAVPAKGLTF SCICLLGGVV
MLYVNPSVIG AFTMITTVSA ILFMFVWTII LCSYLVYRKQ RPHLHEKSIY KMPLGKLMCW
VCMAFFVFVI VLLTLEDDTR QALLVTPLWF IALGLGWLFI GKKRMAK
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