| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4324 |
|---|
| Symbol | fdhF |
|---|
| ID | 5591331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4328421 |
|---|
| End bp | 4330568 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640923422 |
|---|
| Product | formate dehydrogenase H, alpha subunit, selenocysteine-containing |
|---|
| Protein accession | YP_001460867 |
|---|
| Protein GI | 157163549 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCGTCACGGT TTGCCCCTAT TGCGCATCAG GTTGCAAAAT CAACCTGGTC
GTCGATAACG GCAAAATCGT CCGGGCGGAG GCAGCGCAGG GGAAAACCAA CCAGGGTACC
CTGTGTCTGA AGGGTTATTA TGGCTGGGAT TTCATTAACG ATACCCAGAT CCTGACCCCG
CGCCTGAAAA CCCCCATGAT CCGTCGCCAG CGTGGCGGCA AACTCGAACC TGTTTCCTGG
GATGAGGCAC TGAATTACGT TGCCGAGCGC CTGAGCGCCA TCAAAGAGAA GTACGGTCCG
GATGCCATCC AGACGACCGG CTCCTCGCGT GGTACGGGTA ACGAAACCAA CTATGTAATG
CAAAAATTTG CGCGCGCCGT TATTGGTACC AATAACGTTG ACTGCTGCGC TCGTGTCTGA
CACGGCCCAT CGGTTGCAGG TCTGCACCAA TCGGTCGGTA ATGGCGCAAT GAGCAATGCT
ATTAACGAAA TTGATAATAC CGATTTAGTG TTCGTTTTCG GGTACAACCC GGCGGATTCC
CACCCAATCG TGGCGAATCA CGTAATTAAC GCTAAACGTA ACGGGGCGAA AATTATCGTC
TGCGATCCGC GCAAAATTGA AACCGCGCGC ATTGCTGACA TGCACATTGC ACTGAAAAAC
GGCTCGAACA TCGCGCTGTT GAATGCGATG GGCCATGTCA TTATTGAAGA AAATCTGTAC
GACAAAGCGT TCGTCGCTTC CCGTACAGAA GGCTTTGAAG AGTATCGTAA AATCGTTGAA
GGCTACACGC CGGAGTCGGT TGAAGATATC ACCGGCGTCA GCGCCAGTGA GATTCGTCAG
GCGGCACGGA TGTATGCCCA GGCGAAAAGC GCCGCCATCC TGTGGGGCAT GGGTGTAACC
CAGTTCTACC AGGGCGTGGA AACCGTGCGT TCTCTGACCA GCCTCGCGAT GCTGACCGGT
AACCTCGGTA AGCCGCATGC GGGTGTAAAC CCGGTTCGTG GTCAGAACAA CGTGCAGGGT
GCCTGCGATA TGGGCGCGCT GCCGGATACG TATCCGGGAT ACCAGTACGT GAAAGATCCG
GCTAACCGCG AGAAATTCGC CAAAGCCTGG GGCGTGGAAA GCCTGCCTGC TCATACCGGT
TATCGCATCA GCGAGCTGCC GCACCGCGCA GCGCATGGCG AAGTGCGTGC CGCGTACATT
ATGGGCGAAG ATCCGCTGCA AACTGACGCG GAGCTGTCGG CAGTACGTAA AGCCTTTGAA
GATCTGGAAC TGGTTATCGT TCAGGACATC TTTATGACCA AAACCGCGTC GGCGGCGGAT
GTCATTTTGC CGTCAACGTC GTGGGGCGAG CATGAAGGCG TGTTTACTGC GGCTGACCGT
GGCTTCCAGC GTTTCTTCAA AGCAGTTGAA CCGAAATGGG ATCTGAAAAC GGACTGGCAA
ATCATCAGTG AAATCGCCAC CCGTATGGGT TATCCGATGC ACTACAACAA CACCCAGGAG
ATCTGGGATG AGTTGCGTCA TCTGTGCCCG GATTTCTACG GTGCGACTTA CGAGAAAATG
GGCGAACTGG GCTTCATTCA GTGGCCTTGC CGCGATACTT CAGATGCCGA TCAGGGGACT
TCTTATCTGT TTAAAGAGAA GTTTGATACC CCGAACGGTC TGGCACAGTT CTTCACCTGC
GACTGGGTAG CGCCAATCGA CAAACTCACC GACGAGTACC CGATGGTACT GTCAACGGTG
CGTGAAGTTG GTCACTACTC TTGCCGTTCG ATGACCGGTA ACTGTGCGGC ACTGGCGGCG
CTGGCTGATG AACCTGGCTA CGCACAAATC AATACCGAAG ACGCCAAACG TCTGGGTATT
GAAGATGAGG CATTGGTTTG GGTGCACTCG CGTAAAGGCA AAATTATCAC CCGTGCGCAG
GTCAGCGATC GTCCGAACAA AGGGGCGATT TACATGACCT ACCAGTGGTG GATTGGTGCC
TGTAACGAGC TGGTTACCGA AAACTTAAGC CCGATTACGA AAACGCCGGA ATACAAATAC
TGCGCCGTGC GCGTCGAGCC GATCGCCGAT CAGCGCGCCG CCGAGCAGTA CGTGATTGAC
GAGTACAACA AGTTGAAAAC TCGCCTGCGC GAAGCGGCAC TGGCGTAA
|
|---|
| Protein sequence | MKKVVTVCPY CASGCKINLV VDNGKIVRAE AAQGKTNQGT LCLKGYYGWD FINDTQILTP
RLKTPMIRRQ RGGKLEPVSW DEALNYVAER LSAIKEKYGP DAIQTTGSSR GTGNETNYVM
QKFARAVIGT NNVDCCARVU HGPSVAGLHQ SVGNGAMSNA INEIDNTDLV FVFGYNPADS
HPIVANHVIN AKRNGAKIIV CDPRKIETAR IADMHIALKN GSNIALLNAM GHVIIEENLY
DKAFVASRTE GFEEYRKIVE GYTPESVEDI TGVSASEIRQ AARMYAQAKS AAILWGMGVT
QFYQGVETVR SLTSLAMLTG NLGKPHAGVN PVRGQNNVQG ACDMGALPDT YPGYQYVKDP
ANREKFAKAW GVESLPAHTG YRISELPHRA AHGEVRAAYI MGEDPLQTDA ELSAVRKAFE
DLELVIVQDI FMTKTASAAD VILPSTSWGE HEGVFTAADR GFQRFFKAVE PKWDLKTDWQ
IISEIATRMG YPMHYNNTQE IWDELRHLCP DFYGATYEKM GELGFIQWPC RDTSDADQGT
SYLFKEKFDT PNGLAQFFTC DWVAPIDKLT DEYPMVLSTV REVGHYSCRS MTGNCAALAA
LADEPGYAQI NTEDAKRLGI EDEALVWVHS RKGKIITRAQ VSDRPNKGAI YMTYQWWIGA
CNELVTENLS PITKTPEYKY CAVRVEPIAD QRAAEQYVID EYNKLKTRLR EAALA
|
|---|
| |