Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4228 |
Symbol | thiC |
ID | 5591988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4223786 |
End bp | 4225681 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640923332 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001460781 |
Protein GI | 157163463 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCAA CAAAACTGAC CCGCCGCGAA CAACGCGCCC GGGCCCAACA TTTTATCGAC ACCCTGGAAG GCACCGCCTT TCCCAACTCA AAACGCATTT ATATCACTGG CACACACCCC GGCGTGCGCG TGCCGATGCG TGAGATCCAG CTTAGCCCGA CGCTAATTGG CGGTAGCAAA GAACAGCCGC AGTACGAAGA AAACGAAGCG ATTCCGGTCT ACGACACCTC CGGCCCGTAT GGTGATCCGC AGATTGCCAT TAACGTGCAG CAAGGGCTGG CAAAACTACG CCAGCCGTGG ATCGATGCGC GCGGCGATAC CGAAGAACTT ACCGTGCGCA GTTCCGATTA CACTAAAGCG CGGCTGGCAG ATGATGGCCT CGACGAACTG CGTTTTAGCG GTGTACTAAC ACCAAAACGC GCCAAAGCAG GACGCCGTGT CACCCAACTG CACTACGCCC GCCAGGGCAT CATCACGCCG GAAATGGAAT TCATCGCCAT CCGCGAGAAT ATGGGCCGCG AGCGCATCCG TAGCGAGGTT TTACGCCACC AGCATCCGGG AATGAGCTTT GGCGCACATC TGCCGGAAAA TATCACTGCG GAATTTGTCC GTGATGAAGT TGCTGCCGGA CGTGCGATTA TCCCGGCCAA CATTAATCAT CCGGAATCGG AGCCGATGAT TATTGGTCGC AATTTCCTGG TAAAAGTTAA CGCCAATATC GGCAACTCGG CGGTCACCTC TTCCATCGAA GAAGAAGTGG AAAAGCTGGT ATGGTCCACG CGCTGGGGAG CGGATACGGT GATGGATCTC TCCACCGGTC GCTATATTCA CGAAACCCGC GAGTGGATTT TGCGTAACAG CCCGGTGCCG ATCGGTACAG TGCCGATCTA CCAGGCGCTG GAGAAGGTTA ACGGGATCGC CGAAGATCTT ACCTGGGAAG CGTTCCGCGA CACGCTGCTG GAACAGGCCG AGCAAGGTGT GGATTACTTC ACTATCCATG CGGGCGTACT GCTGCGCTAT GTGCCGATGA CCGCGAAACG CCTGACCGGT ATCGTCTCTC GCGGCGGTTC GATTATGGCG AAATGGTGCC TCTCCCATCA TCAGGAAAAT TTCCTCTATC AACACTTCCG CGAAATTTGT GAAATCTGTG CCGCTTATGA CGTTTCGCTG TCGCTGGGCG ACGGTCTGCG CCCCGGTTCT ATTCAGGACG CCAACGATGA AGCGCAGTTT GCCGAGCTGC ATACGCTGGG CGAACTGACC AAAATTGCCT GGGAATATGA CGTGCAGGTG ATGATTGAAG GCCCAGGTCA CGTGCCGATG CAGATGATCC GCCGCAATAT GACCGAGGAG TTAGAGCACT GCCACGAAGC GCCGTTTTAC ACTCTGGGGC CGCTAACTAC CGATATTGCG CCGGGCTATG ACCACTTCAC GTCGGGGATT GGTGCGGCGA TGATTGGCTG GTTTGGCTGC GCGATGCTCT GTTACGTAAC GCCAAAAGAG CATCTGGGTC TGCCTAATAA AGAAGATGTT AAGCAGGGGC TTATCACCTA TAAGATTGCC GCCCACGCCG CTGACCTGGC GAAAGGGCAT CCGGGCGCGC AAATTCGCGA TAACGCCATG TCGAAAGCCC GCTTCGAATT TCGCTGGGAA GACCAGTTTA ATCTGGCCCT CGACCCGTTT ACCGCCCGCG CTTATCACGA TGAAACCCTG CCGCAAGAGT CAGGTAAAGT CGCCCATTTT TGCTCCATGT GTGGGCCGAA ATTCTGTTCG ATGAAAATCA GCCAGGAAGT GCGTGATTAC GCCGCCACGC AAACTATTGA AATGGGAATG GCGGATATGT CGGAGAACTT CCGTGCCAGA GGCGGAGAAA TCTACCTGCG TAAGGAGGAA GCGTGA
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Protein sequence | MSATKLTRRE QRARAQHFID TLEGTAFPNS KRIYITGTHP GVRVPMREIQ LSPTLIGGSK EQPQYEENEA IPVYDTSGPY GDPQIAINVQ QGLAKLRQPW IDARGDTEEL TVRSSDYTKA RLADDGLDEL RFSGVLTPKR AKAGRRVTQL HYARQGIITP EMEFIAIREN MGRERIRSEV LRHQHPGMSF GAHLPENITA EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI GNSAVTSSIE EEVEKLVWST RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA KWCLSHHQEN FLYQHFREIC EICAAYDVSL SLGDGLRPGS IQDANDEAQF AELHTLGELT KIAWEYDVQV MIEGPGHVPM QMIRRNMTEE LEHCHEAPFY TLGPLTTDIA PGYDHFTSGI GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM SKARFEFRWE DQFNLALDPF TARAYHDETL PQESGKVAHF CSMCGPKFCS MKISQEVRDY AATQTIEMGM ADMSENFRAR GGEIYLRKEE A
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