| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4190 |
|---|
| Symbol | ppc |
|---|
| ID | 5594138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4180359 |
|---|
| End bp | 4183010 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640923292 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_001460751 |
|---|
| Protein GI | 157163433 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC AATATTCCGC ATTGCGTAGT AATGTCAGTA TGCTCGGCAA AGTGCTGGGA
GAAACCATCA AGGATGCGTT GGGAGAACAC ATTCTTGAAC GCGTAGAAAC TATCCGTAAG
TTGTCGAAAT CTTCACGCGC TGGCAATGAT GCTAACCGCC AGGAGTTGCT CACCACCTTA
CAAAATTTGT CGAACGACGA GCTGCTGCCC GTTGCGCGTG CGTTTAGTCA GTTCCTGAAC
CTGGCCAACA CCGCCGAGCA ATACCACAGC ATTTCGCCGA AAGGCGAAGC TGCCAGCAAC
CCGGAAGTGA TCGCCCGCAC CCTGCGTAAA CTGAAAAACC AGCCGGAACT GAGCGAAGAC
ACCATCAAAA AAGCAGTGGA ATCGCTGTCG CTGGAACTGG TCCTCACGGC TCACCCAACC
GAAATTACCC GTCGTACACT GATCCACAAA ATGGTGGAAG TGAACGCCTG TTTAAAACAG
CTCGATAACA AAGATATCGC TGACTACGAA CACAACCAGC TGATGCGTCG CCTGCGCCAG
TTGATCGCCC AGTCATGGCA TACCGATGAA ATCCGTAAGC TGCGTCCAAG CCCGGTAGAT
GAAGCCAAAT GGGGCTTTGC CGTAGTGGAA AACAGCCTGT GGCAAGGCGT ACCAAATTAC
CTGCGCGAAC TGAACGAACA ACTGGAAGAG AACCTCGGCT ACAAACTGCC CGTCGAATTT
GTTCCGGTCC GTTTTACTTC GTGGATGGGC GGCGACCGCG ACGGCAACCC GAACGTCACT
GCCGATATCA CCCGCCACGT CCTGCTACTC AGCCGCTGGA AAGCCACCGA TTTGTTCCTG
AAAGATATTC AGGTGCTGGT TTCTGAACTG TCGATGGTTG AAGCGACCCC TGAACTGCTG
GCGCTGGTTG GCGAAGAAGG TGCCGCAGAA CCGTATCGCT ATCTGATGAA AAACCTGCGT
TCTCGCCTGA TGGCGACACA GGCATGGCTG GAAGCGCGCC TGAAAGGCGA AGAACTGCCA
AAACCAGAAG GCCTGCTGAC ACAAAACGAA GAACTGTGGG AACCGCTCTA CGCTTGCTAC
CAGTCACTTC AGGCGTGTGG CATGGGTATT ATCGCCAACG GCGATCTGCT CGACACCCTG
CGCCGCGTGA AATGTTTCGG CGTACCGCTG GTCCGTATTG ATATCCGTCA GGAGAGCACG
CGTCATACCG AAGCGCTGGG CGAGCTGACC CGCTACCTCG GTATCGGCGA CTACGAAAGC
TGGTCAGAGG CCGACAAACA GGCGTTCCTG ATCCGCGAAC TGAACTCCAA ACGTCCGCTT
CTGCCGCGCA ACTGGCAACC AAGCGCCGAA ACGCGCGAAG TGCTCGATAC CTGCCAGGTG
ATTGCCGAAG CACCGCAAGG CTCCATTGCC GCCTACGTGA TCTCGATGGC GAAAACGCCG
TCCGACGTAC TGGCTGTCCA CCTGCTGCTG AAAGAAGCGG GTATCGGGTT TGCGATGCCG
GTTGCTCCGC TGTTTGAAAC CCTCGATGAT CTGAACAACG CCAACGATGT CATGACCCAG
CTGCTCAATA TTGACTGGTA TCGTGGCCTG ATTCAGGGCA AACAGATGGT GATGATTGGC
TATTCCGACT CAGCAAAAGA TGCGGGAGTG ATGGCAGCTT CCTGGGCGCA ATATCAGGCA
CAGGATGCAT TAATCAAAAC CTGCGAAAAA GCGGGTATTG AGCTGACGTT GTTCCACGGT
CGCGGCGGTT CCATTGGTCG CGGCGGCGCA CCTGCTCATG CGGCGCTGCT GTCACAACCG
CCAGGAAGCC TGAAAGGTGG CCTGCGCGTG ACTGAACAGG GCGAGATGAT CCGCTTTAAA
TATGGTCTGC CAGAAATCAC CGTCAGCAGC CTGTCGCTGT ACACCGGGGC GATTCTGGAA
GCCAACCTGC TGCCACCACC TGAGCCGAAA GAGAGCTGGC GTCGCATTAT GGATGAACTG
TCAGTCATCT CCTGCGATCT CTACCGTGGC TACGTACGTG AAAACAAAGA TTTTGTGCCT
TACTTCCGCT CCGCTACGCC GGAACAAGAA TTGGGCAAAC TGCCGTTGGG TTCACGTCCG
GCGAAACGTC GCCCAACCGG CGGCGTCGAG TCACTACGCG CCATTCCGTG GATCTTCGCC
TGGACGCAAA ACCGTCTGAT GCTCCCCGCC TGGCTGGGTG CAGGTACGGC GCTGCAAAAA
GTGGTCGAAG ACGGCAAACA GAGCGAGCTG GAGGCTATGT GCCGCGATTG GCCATTCTTC
TCGACGCGTC TCGGCATGCT GGAGATGGTC TTCGCCAAAG CAGACCTGTG GCTGGCGGAA
TACTATGACC AACGCCTGGT AGACAAAGCA CTGTGGCCGT TAGGTAAAGA GTTACGCAAC
CTGCAAGAAG AAGACATCAA AGTGGTGCTG GCGATTGCCA ACGATTCCCA TCTGATGGCC
GATCTGCCGT GGATTGCAGA GTCTATTCAG CTACGGAATA TTTACACCGA CCCGCTGAAC
GTATTGCAGG CCGAGTTGCT GCACCGCTCC CGCCAGGCAG AAAAAGAAGG CCAGGAACCG
GATCCTCGCG TCGAACAAGC GTTAATGGTC ACTATTGCCG GGATTGCGGC AGGTATGCGT
AATACCGGCT AA
|
|---|
| Protein sequence | MNEQYSALRS NVSMLGKVLG ETIKDALGEH ILERVETIRK LSKSSRAGND ANRQELLTTL
QNLSNDELLP VARAFSQFLN LANTAEQYHS ISPKGEAASN PEVIARTLRK LKNQPELSED
TIKKAVESLS LELVLTAHPT EITRRTLIHK MVEVNACLKQ LDNKDIADYE HNQLMRRLRQ
LIAQSWHTDE IRKLRPSPVD EAKWGFAVVE NSLWQGVPNY LRELNEQLEE NLGYKLPVEF
VPVRFTSWMG GDRDGNPNVT ADITRHVLLL SRWKATDLFL KDIQVLVSEL SMVEATPELL
ALVGEEGAAE PYRYLMKNLR SRLMATQAWL EARLKGEELP KPEGLLTQNE ELWEPLYACY
QSLQACGMGI IANGDLLDTL RRVKCFGVPL VRIDIRQEST RHTEALGELT RYLGIGDYES
WSEADKQAFL IRELNSKRPL LPRNWQPSAE TREVLDTCQV IAEAPQGSIA AYVISMAKTP
SDVLAVHLLL KEAGIGFAMP VAPLFETLDD LNNANDVMTQ LLNIDWYRGL IQGKQMVMIG
YSDSAKDAGV MAASWAQYQA QDALIKTCEK AGIELTLFHG RGGSIGRGGA PAHAALLSQP
PGSLKGGLRV TEQGEMIRFK YGLPEITVSS LSLYTGAILE ANLLPPPEPK ESWRRIMDEL
SVISCDLYRG YVRENKDFVP YFRSATPEQE LGKLPLGSRP AKRRPTGGVE SLRAIPWIFA
WTQNRLMLPA WLGAGTALQK VVEDGKQSEL EAMCRDWPFF STRLGMLEMV FAKADLWLAE
YYDQRLVDKA LWPLGKELRN LQEEDIKVVL AIANDSHLMA DLPWIAESIQ LRNIYTDPLN
VLQAELLHRS RQAEKEGQEP DPRVEQALMV TIAGIAAGMR NTG
|
|---|
| |